| rpmF protein network | https://string-db.org/network/699218.HMPREF0889_0001 | Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family. |
| ruvC protein network | https://string-db.org/network/699218.HMPREF0889_0002 | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to st [...] |
| ruvA protein network | https://string-db.org/network/699218.HMPREF0889_0003 | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...] |
| ruvB protein network | https://string-db.org/network/699218.HMPREF0889_0004 | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...] |
| EFD94589.1 protein network | https://string-db.org/network/699218.HMPREF0889_0005 | SpoIID/LytB domain protein; Identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669. |
| queA protein network | https://string-db.org/network/699218.HMPREF0889_0006 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ [...] |
| tgt protein network | https://string-db.org/network/699218.HMPREF0889_0007 | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in t [...] |
| yajC protein network | https://string-db.org/network/699218.HMPREF0889_0008 | Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739. |
| EFD94593.1 protein network | https://string-db.org/network/699218.HMPREF0889_0009 | 5-formyltetrahydrofolate cyclo-ligase; Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. |
| secD protein network | https://string-db.org/network/699218.HMPREF0889_0010 | Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein tr [...] |
| secF protein network | https://string-db.org/network/699218.HMPREF0889_0011 | Export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein tr [...] |
| EFD94596.1 protein network | https://string-db.org/network/699218.HMPREF0889_0012 | Hypothetical protein. |
| EFD94597.1 protein network | https://string-db.org/network/699218.HMPREF0889_0013 | Identified by match to protein family HMM PF02632. |
| deoD protein network | https://string-db.org/network/699218.HMPREF0889_0014 | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. |
| EFD94599.1 protein network | https://string-db.org/network/699218.HMPREF0889_0015 | Putative queuosine biosynthesis protein QueD; Identified by match to protein family HMM PF01242. |
| queE protein network | https://string-db.org/network/699218.HMPREF0889_0016 | Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- de [...] |
| EFD94601.1 protein network | https://string-db.org/network/699218.HMPREF0889_0017 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. |
| EFD94602.1 protein network | https://string-db.org/network/699218.HMPREF0889_0018 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. |
| EFD94603.1 protein network | https://string-db.org/network/699218.HMPREF0889_0019 | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to pr [...] |
| EFD94604.1 protein network | https://string-db.org/network/699218.HMPREF0889_0020 | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879. |
| lysR protein network | https://string-db.org/network/699218.HMPREF0889_0021 | LysR substrate binding domain protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. |
| nifJ protein network | https://string-db.org/network/699218.HMPREF0889_0022 | Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. |
| EFD94607.1 protein network | https://string-db.org/network/699218.HMPREF0889_0023 | Hypothetical protein. |
| EFD94608.1 protein network | https://string-db.org/network/699218.HMPREF0889_0024 | Rubredoxin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. |
| EFD94609.1 protein network | https://string-db.org/network/699218.HMPREF0889_0025 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94610.1 protein network | https://string-db.org/network/699218.HMPREF0889_0026 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94611.1 protein network | https://string-db.org/network/699218.HMPREF0889_0027 | Hypothetical protein. |
| EFD94612.1 protein network | https://string-db.org/network/699218.HMPREF0889_0028 | Putative dGTPase; Identified by match to protein family HMM PF01966. |
| EFD94613.1 protein network | https://string-db.org/network/699218.HMPREF0889_0029 | Identified by match to protein family HMM PF07866. |
| EFD94614.1 protein network | https://string-db.org/network/699218.HMPREF0889_0030 | Hydrid cluster protein-associated redox disulfide domain protein; Identified by match to protein family HMM PF08984. |
| EFD94615.1 protein network | https://string-db.org/network/699218.HMPREF0889_0031 | Identified by match to protein family HMM PF09148. |
| argS protein network | https://string-db.org/network/699218.HMPREF0889_0032 | arginine--tRNA ligase; Identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456. |
| pyrG protein network | https://string-db.org/network/699218.HMPREF0889_0033 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...] |
| rnfC protein network | https://string-db.org/network/699218.HMPREF0889_0034 | Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacteri [...] |
| rnfD protein network | https://string-db.org/network/699218.HMPREF0889_0035 | Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD fam [...] |
| rnfG protein network | https://string-db.org/network/699218.HMPREF0889_0036 | Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. |
| rnfE protein network | https://string-db.org/network/699218.HMPREF0889_0037 | Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. |
| rnfA protein network | https://string-db.org/network/699218.HMPREF0889_0038 | Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. |
| rnfB protein network | https://string-db.org/network/699218.HMPREF0889_0039 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacteri [...] |
| EFD94624.1 protein network | https://string-db.org/network/699218.HMPREF0889_0040 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. |
| EFD94625.1 protein network | https://string-db.org/network/699218.HMPREF0889_0041 | Transcriptional regulator, AsnC family; Identified by match to protein family HMM PF01037. |
| EFD94626.1 protein network | https://string-db.org/network/699218.HMPREF0889_0042 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD94627.1 protein network | https://string-db.org/network/699218.HMPREF0889_0043 | Putative glycolate oxidase, subunit GlcD; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913. |
| EFD94628.1 protein network | https://string-db.org/network/699218.HMPREF0889_0044 | CoA transferase; Identified by match to protein family HMM PF01144; Belongs to the 3-oxoacid CoA-transferase family. |
| fumC protein network | https://string-db.org/network/699218.HMPREF0889_0045 | Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamil [...] |
| bioW protein network | https://string-db.org/network/699218.HMPREF0889_0046 | 6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP. |
| EFD94631.1 protein network | https://string-db.org/network/699218.HMPREF0889_0047 | Putative 8-amino-7-oxononanoate synthase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. |
| EFD94632.1 protein network | https://string-db.org/network/699218.HMPREF0889_0048 | BioX family protein. |
| EFD94633.1 protein network | https://string-db.org/network/699218.HMPREF0889_0049 | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfami [...] |
| EFD94634.1 protein network | https://string-db.org/network/699218.HMPREF0889_0050 | Hypothetical protein; Identified by glimmer; putative; Belongs to the UPF0342 family. |
| murB protein network | https://string-db.org/network/699218.HMPREF0889_0051 | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. |
| typA protein network | https://string-db.org/network/699218.HMPREF0889_0052 | GTP-binding protein TypA; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF01926; match to protein family HMM PF03144; match t [...] |
| EFD94637.1 protein network | https://string-db.org/network/699218.HMPREF0889_0053 | Hypothetical protein. |
| EFD94638.1 protein network | https://string-db.org/network/699218.HMPREF0889_0054 | Identified by match to protein family HMM PF00395. |
| glyQ protein network | https://string-db.org/network/699218.HMPREF0889_0055 | glycine--tRNA ligase, alpha subunit; Identified by match to protein family HMM PF02091; match to protein family HMM TIGR00388. |
| glyS protein network | https://string-db.org/network/699218.HMPREF0889_0056 | glycine--tRNA ligase, beta subunit; Identified by match to protein family HMM PF02092; match to protein family HMM TIGR00211. |
| EFD94641.1 protein network | https://string-db.org/network/699218.HMPREF0889_0057 | Hypothetical protein; Identified by glimmer; putative. |
| alr protein network | https://string-db.org/network/699218.HMPREF0889_0058 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. |
| EFD94643.1 protein network | https://string-db.org/network/699218.HMPREF0889_0059 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01212. |
| EFD94644.1 protein network | https://string-db.org/network/699218.HMPREF0889_0060 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94645.1 protein network | https://string-db.org/network/699218.HMPREF0889_0061 | Identified by match to protein family HMM PF05656. |
| EFD94646.1 protein network | https://string-db.org/network/699218.HMPREF0889_0062 | Identified by match to protein family HMM PF05656. |
| EFD94647.1 protein network | https://string-db.org/network/699218.HMPREF0889_0063 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94648.1 protein network | https://string-db.org/network/699218.HMPREF0889_0064 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02805. |
| feoA protein network | https://string-db.org/network/699218.HMPREF0889_0065 | FeoA domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be m [...] |
| EFD94650.1 protein network | https://string-db.org/network/699218.HMPREF0889_0066 | FeoA domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be m [...] |
| feoB protein network | https://string-db.org/network/699218.HMPREF0889_0067 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) [...] |
| EFD94652.1 protein network | https://string-db.org/network/699218.HMPREF0889_0068 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94653.1 protein network | https://string-db.org/network/699218.HMPREF0889_0069 | DHHA2 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02833. |
| pcrA protein network | https://string-db.org/network/699218.HMPREF0889_0070 | ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073. |
| ligA protein network | https://string-db.org/network/699218.HMPREF0889_0071 | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energ [...] |
| gatC protein network | https://string-db.org/network/699218.HMPREF0889_0072 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Gl [...] |
| gatA protein network | https://string-db.org/network/699218.HMPREF0889_0073 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lac [...] |
| gatB protein network | https://string-db.org/network/699218.HMPREF0889_0074 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Gl [...] |
| EFD94659.1 protein network | https://string-db.org/network/699218.HMPREF0889_0075 | Transporter, DASS family; Identified by match to protein family HMM PF00939; match to protein family HMM TIGR00785. |
| EFD94660.1 protein network | https://string-db.org/network/699218.HMPREF0889_0076 | Bacterial transferase hexapeptide repeat protein. |
| EFD94661.1 protein network | https://string-db.org/network/699218.HMPREF0889_0077 | Succinate CoA transferase; Identified by match to protein family HMM PF02550; match to protein family HMM TIGR03458. |
| EFD94662.1 protein network | https://string-db.org/network/699218.HMPREF0889_0078 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. |
| EFD94663.1 protein network | https://string-db.org/network/699218.HMPREF0889_0079 | Hypothetical protein; Identified by glimmer; putative. |
| tonB protein network | https://string-db.org/network/699218.HMPREF0889_0080 | TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. |
| uvrB protein network | https://string-db.org/network/699218.HMPREF0889_0081 | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for ab [...] |
| uvrA protein network | https://string-db.org/network/699218.HMPREF0889_0082 | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...] |
| uvrC protein network | https://string-db.org/network/699218.HMPREF0889_0083 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsi [...] |
| EFD94668.1 protein network | https://string-db.org/network/699218.HMPREF0889_0084 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94669.1 protein network | https://string-db.org/network/699218.HMPREF0889_0085 | Rubredoxin; Identified by match to protein family HMM PF00301. |
| EFD94670.1 protein network | https://string-db.org/network/699218.HMPREF0889_0086 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. |
| EFD94671.1 protein network | https://string-db.org/network/699218.HMPREF0889_0087 | Hep/Hag repeat protein; Identified by match to protein family HMM PF05658; match to protein family HMM PF05662. |
| EFD94672.1 protein network | https://string-db.org/network/699218.HMPREF0889_0088 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94673.1 protein network | https://string-db.org/network/699218.HMPREF0889_0089 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. |
| EFD94674.1 protein network | https://string-db.org/network/699218.HMPREF0889_0090 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. |
| agcS protein network | https://string-db.org/network/699218.HMPREF0889_0091 | Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835. |
| surE protein network | https://string-db.org/network/699218.HMPREF0889_0092 | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. |
| EFD94677.1 protein network | https://string-db.org/network/699218.HMPREF0889_0093 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. |
| EFD94678.1 protein network | https://string-db.org/network/699218.HMPREF0889_0094 | Putative CDP-diacylglycerol-serine O-phosphatidyltransferase; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. |
| psd protein network | https://string-db.org/network/699218.HMPREF0889_0095 | Phosphatidylserine decarboxylase; Identified by match to protein family HMM PF02666; match to protein family HMM TIGR00164. |
| EFD94680.1 protein network | https://string-db.org/network/699218.HMPREF0889_0096 | Glycosyltransferase, WecB/TagA/CpsF family; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosyltransferase 26 family. |
| guaB protein network | https://string-db.org/network/699218.HMPREF0889_0097 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...] |
| recG protein network | https://string-db.org/network/699218.HMPREF0889_0098 | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwindin [...] |
| rpmB protein network | https://string-db.org/network/699218.HMPREF0889_0099 | Ribosomal protein L28; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00830; match to protein family HMM TIGR [...] |
| EFD93434.1 protein network | https://string-db.org/network/699218.HMPREF0889_0101 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative. |
| EFD93230.1 protein network | https://string-db.org/network/699218.HMPREF0889_0102 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93231.1 protein network | https://string-db.org/network/699218.HMPREF0889_0103 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93232.1 protein network | https://string-db.org/network/699218.HMPREF0889_0104 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. |
| EFD93233.1 protein network | https://string-db.org/network/699218.HMPREF0889_0105 | Hypothetical protein. |
| EFD93234.1 protein network | https://string-db.org/network/699218.HMPREF0889_0106 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93235.1 protein network | https://string-db.org/network/699218.HMPREF0889_0107 | RNA polymerase sigma factor, sigma-70 family. |
| vsr protein network | https://string-db.org/network/699218.HMPREF0889_0108 | DNA mismatch endonuclease Vsr; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. |
| EFD93237.1 protein network | https://string-db.org/network/699218.HMPREF0889_0109 | Hypothetical protein. |
| EFD93238.1 protein network | https://string-db.org/network/699218.HMPREF0889_0110 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93239.1 protein network | https://string-db.org/network/699218.HMPREF0889_0111 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. |
| EFD93240.1 protein network | https://string-db.org/network/699218.HMPREF0889_0112 | Iron chelate uptake ABC transporter, FeCT family, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. F [...] |
| fhuC protein network | https://string-db.org/network/699218.HMPREF0889_0113 | Ferrichrome ABC transporter, ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. |
| tonB-2 protein network | https://string-db.org/network/699218.HMPREF0889_0114 | TonB-dependent receptor plug domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF07715. |
| EFD93473.1 protein network | https://string-db.org/network/699218.HMPREF0889_0116 | Putative L-lactate dehydrogenase; Identified by match to protein family HMM PF00056; match to protein family HMM PF02866; Belongs to the LDH/MDH superfamily. |
| lysP protein network | https://string-db.org/network/699218.HMPREF0889_0117 | Lysine-specific permease; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to [...] |
| EFD93475.1 protein network | https://string-db.org/network/699218.HMPREF0889_0118 | Chorismate mutase; Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01805. |
| recD2 protein network | https://string-db.org/network/699218.HMPREF0889_0119 | Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase a [...] |
| EFD93477.1 protein network | https://string-db.org/network/699218.HMPREF0889_0120 | comF family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. |
| EFD94786.1 protein network | https://string-db.org/network/699218.HMPREF0889_0121 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF0 [...] |
| EFD93435.1 protein network | https://string-db.org/network/699218.HMPREF0889_0122 | ABC transporter, substrate-binding protein, family 3; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00497; B [...] |
| EFD93436.1 protein network | https://string-db.org/network/699218.HMPREF0889_0123 | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. |
| EFD93437.1 protein network | https://string-db.org/network/699218.HMPREF0889_0124 | Hypothetical protein; Identified by glimmer; putative. |
| whiA protein network | https://string-db.org/network/699218.HMPREF0889_0125 | Hypothetical protein; Involved in cell division and chromosome segregation. |
| EFD93439.1 protein network | https://string-db.org/network/699218.HMPREF0889_0126 | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. |
| EFD93440.1 protein network | https://string-db.org/network/699218.HMPREF0889_0127 | Hypothetical protein; Displays ATPase and GTPase activities. |
| EFD93441.1 protein network | https://string-db.org/network/699218.HMPREF0889_0128 | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to pr [...] |
| EFD93442.1 protein network | https://string-db.org/network/699218.HMPREF0889_0129 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93443.1 protein network | https://string-db.org/network/699218.HMPREF0889_0130 | DivIVA domain protein; Identified by match to protein family HMM PF05103; match to protein family HMM TIGR03544. |
| EFD93444.1 protein network | https://string-db.org/network/699218.HMPREF0889_0131 | S4 domain protein; Identified by match to protein family HMM PF01479. |
| sepF protein network | https://string-db.org/network/699218.HMPREF0889_0132 | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of F [...] |
| EFD93446.1 protein network | https://string-db.org/network/699218.HMPREF0889_0133 | Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. |
| EFD93447.1 protein network | https://string-db.org/network/699218.HMPREF0889_0134 | Conserved hypothetical protein, YfiH family; Identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family. |
| EFD93448.1 protein network | https://string-db.org/network/699218.HMPREF0889_0137 | Integrase core domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00665. |
| EFD93470.1 protein network | https://string-db.org/network/699218.HMPREF0889_0138 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative. |
| EFD93471.1 protein network | https://string-db.org/network/699218.HMPREF0889_0139 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative. |
| EFD94139.1 protein network | https://string-db.org/network/699218.HMPREF0889_0140 | Lipoprotein, YaeC family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF03180; match to protein family HMM T [...] |
| EFD94140.1 protein network | https://string-db.org/network/699218.HMPREF0889_0141 | Putative thioredoxin; Identified by match to protein family HMM PF00085; Belongs to the thioredoxin family. |
| EFD94141.1 protein network | https://string-db.org/network/699218.HMPREF0889_0142 | Identified by match to protein family HMM PF03061. |
| EFD94142.1 protein network | https://string-db.org/network/699218.HMPREF0889_0143 | Flavodoxin; Identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753. |
| EFD94143.1 protein network | https://string-db.org/network/699218.HMPREF0889_0144 | Hypothetical protein. |
| EFD94144.1 protein network | https://string-db.org/network/699218.HMPREF0889_0145 | Exonuclease; Identified by match to protein family HMM PF00929. |
| EFD94145.1 protein network | https://string-db.org/network/699218.HMPREF0889_0146 | Identified by match to protein family HMM PF07009. |
| EFD94146.1 protein network | https://string-db.org/network/699218.HMPREF0889_0147 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. |
| gmhA protein network | https://string-db.org/network/699218.HMPREF0889_0148 | Putative phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily. |
| cah protein network | https://string-db.org/network/699218.HMPREF0889_0149 | Carbonate dehydratase; Identified by match to protein family HMM PF00484. |
| EFD94149.1 protein network | https://string-db.org/network/699218.HMPREF0889_0150 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. |
| EFD94150.1 protein network | https://string-db.org/network/699218.HMPREF0889_0152 | Hypothetical protein; Identified by glimmer; putative. |
| pta protein network | https://string-db.org/network/699218.HMPREF0889_0153 | Phosphate acetyltransferase; Identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651. |
| EFD94152.1 protein network | https://string-db.org/network/699218.HMPREF0889_0154 | 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; Identified by match to protein family HMM PF01558. |
| EFD94153.1 protein network | https://string-db.org/network/699218.HMPREF0889_0155 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; Identified by match to protein family HMM PF02775. |
| EFD94154.1 protein network | https://string-db.org/network/699218.HMPREF0889_0156 | 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin); Identified by match to protein family HMM PF01855; match to protein family HMM PF02780. |
| EFD94155.1 protein network | https://string-db.org/network/699218.HMPREF0889_0157 | 4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037. |
| EFD94156.1 protein network | https://string-db.org/network/699218.HMPREF0889_0158 | Hypothetical protein. |
| EFD94157.1 protein network | https://string-db.org/network/699218.HMPREF0889_0159 | Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family. |
| EFD94158.1 protein network | https://string-db.org/network/699218.HMPREF0889_0160 | Identified by match to protein family HMM PF04286. |
| EFD94159.1 protein network | https://string-db.org/network/699218.HMPREF0889_0161 | Identified by match to protein family HMM PF04286. |
| EFD94160.1 protein network | https://string-db.org/network/699218.HMPREF0889_0162 | Hypothetical protein. |
| EFD94161.1 protein network | https://string-db.org/network/699218.HMPREF0889_0163 | Putative iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF08331. |
| sppA protein network | https://string-db.org/network/699218.HMPREF0889_0164 | Signal peptide peptidase SppA, 36K type; Identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706. |
| dnaB protein network | https://string-db.org/network/699218.HMPREF0889_0165 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. |
| lonC protein network | https://string-db.org/network/699218.HMPREF0889_0166 | ATP-dependent protease, Lon family; Identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF05362; match to protein family HMM PF0772 [...] |
| rplI protein network | https://string-db.org/network/699218.HMPREF0889_0167 | Ribosomal protein L9; Binds to the 23S rRNA. |
| EFD94166.1 protein network | https://string-db.org/network/699218.HMPREF0889_0168 | DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. |
| EFD94167.1 protein network | https://string-db.org/network/699218.HMPREF0889_0169 | Hypothetical protein. |
| rnj protein network | https://string-db.org/network/699218.HMPREF0889_0170 | Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. |
| EFD94169.1 protein network | https://string-db.org/network/699218.HMPREF0889_0171 | Hypothetical protein; Identified by glimmer; putative. |
| thiD protein network | https://string-db.org/network/699218.HMPREF0889_0172 | Phosphomethylpyrimidine kinase; Identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097. |
| EFD94171.1 protein network | https://string-db.org/network/699218.HMPREF0889_0173 | Putative phosphohistidine phosphatase SixA; Identified by match to protein family HMM PF00300. |
| EFD94172.1 protein network | https://string-db.org/network/699218.HMPREF0889_0174 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. |
| EFD94173.1 protein network | https://string-db.org/network/699218.HMPREF0889_0175 | Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. |
| EFD94174.1 protein network | https://string-db.org/network/699218.HMPREF0889_0176 | ABC 3 transport family protein; Identified by match to protein family HMM PF00950; match to protein family HMM PF01032. |
| EFD94175.1 protein network | https://string-db.org/network/699218.HMPREF0889_0177 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD94176.1 protein network | https://string-db.org/network/699218.HMPREF0889_0178 | ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. |
| EFD94177.1 protein network | https://string-db.org/network/699218.HMPREF0889_0179 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. |
| EFD94178.1 protein network | https://string-db.org/network/699218.HMPREF0889_0180 | Putative Ferredoxin-like protein FixX. |
| EFD94179.1 protein network | https://string-db.org/network/699218.HMPREF0889_0181 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF03486. |
| ubiE protein network | https://string-db.org/network/699218.HMPREF0889_0182 | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). |
| EFD94181.1 protein network | https://string-db.org/network/699218.HMPREF0889_0183 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Identified by match to protein family HMM PF01040. |
| EFD94182.1 protein network | https://string-db.org/network/699218.HMPREF0889_0184 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. |
| EFD94183.1 protein network | https://string-db.org/network/699218.HMPREF0889_0185 | Putative iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF02589; match to protein family HMM PF02754. |
| EFD94184.1 protein network | https://string-db.org/network/699218.HMPREF0889_0186 | Identified by match to protein family HMM PF02589. |
| EFD94185.1 protein network | https://string-db.org/network/699218.HMPREF0889_0187 | Identified by match to protein family HMM PF07892. |
| EFD94186.1 protein network | https://string-db.org/network/699218.HMPREF0889_0188 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF07992. |
| EFD94187.1 protein network | https://string-db.org/network/699218.HMPREF0889_0189 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324. |
| cas2 protein network | https://string-db.org/network/699218.HMPREF0889_0191 | CRISPR-associated endoribonuclease Cas2; Identified by match to protein family HMM PF09707; match to protein family HMM TIGR01873. |
| cas1 protein network | https://string-db.org/network/699218.HMPREF0889_0192 | CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viru [...] |
| casE protein network | https://string-db.org/network/699218.HMPREF0889_0193 | CRISPR system CASCADE complex protein CasE; Identified by match to protein family HMM PF08798; match to protein family HMM TIGR01907. |
| casD protein network | https://string-db.org/network/699218.HMPREF0889_0194 | CRISPR system CASCADE complex protein CasD; Identified by match to protein family HMM PF09708; match to protein family HMM TIGR01868; match to protein family HMM TIGR02593. |
| casC protein network | https://string-db.org/network/699218.HMPREF0889_0195 | CRISPR system CASCADE complex protein CasC; Identified by match to protein family HMM PF09344; match to protein family HMM TIGR01869. |
| casB protein network | https://string-db.org/network/699218.HMPREF0889_0196 | CRISPR system CASCADE complex protein CasB; Identified by match to protein family HMM PF09485; match to protein family HMM TIGR02548. |
| casA protein network | https://string-db.org/network/699218.HMPREF0889_0197 | CRISPR system CASCADE complex protein CasA; Identified by match to protein family HMM PF09481; match to protein family HMM TIGR02547. |
| cas3 protein network | https://string-db.org/network/699218.HMPREF0889_0198 | CRISPR-associated helicase Cas3; Identified by match to protein family HMM PF00271; match to protein family HMM TIGR01587; match to protein family HMM TIGR01596. |
| EFD93807.1 protein network | https://string-db.org/network/699218.HMPREF0889_0199 | Histidine triad domain protein; Identified by match to protein family HMM PF01230. |
| yqeV protein network | https://string-db.org/network/699218.HMPREF0889_0200 | tRNA methylthiotransferase YqeV; Identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR015 [...] |
| EFD93809.1 protein network | https://string-db.org/network/699218.HMPREF0889_0201 | RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. |
| prmA protein network | https://string-db.org/network/699218.HMPREF0889_0202 | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. |
| dnaJ protein network | https://string-db.org/network/699218.HMPREF0889_0203 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...] |
| dnaK protein network | https://string-db.org/network/699218.HMPREF0889_0204 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. |
| grpE protein network | https://string-db.org/network/699218.HMPREF0889_0205 | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nu [...] |
| hrcA protein network | https://string-db.org/network/699218.HMPREF0889_0206 | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. |
| EFD93815.1 protein network | https://string-db.org/network/699218.HMPREF0889_0207 | Aminopeptidase I zinc metalloprotease (M18); Identified by match to protein family HMM PF02127. |
| EFD93816.1 protein network | https://string-db.org/network/699218.HMPREF0889_0208 | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. |
| EFD93817.1 protein network | https://string-db.org/network/699218.HMPREF0889_0209 | Identified by match to protein family HMM PF01205; match to protein family HMM PF09186; match to protein family HMM TIGR00257. |
| metN protein network | https://string-db.org/network/699218.HMPREF0889_0211 | Putative D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. |
| EFD93819.1 protein network | https://string-db.org/network/699218.HMPREF0889_0212 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. |
| EFD93820.1 protein network | https://string-db.org/network/699218.HMPREF0889_0214 | Hypothetical protein. |
| EFD93821.1 protein network | https://string-db.org/network/699218.HMPREF0889_0215 | Hypothetical protein; Identified by glimmer; putative. |
| pncB protein network | https://string-db.org/network/699218.HMPREF0889_0216 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and [...] |
| EFD93823.1 protein network | https://string-db.org/network/699218.HMPREF0889_0217 | Putative membrane protein; Identified by match to protein family HMM PF00892. |
| EFD93824.1 protein network | https://string-db.org/network/699218.HMPREF0889_0218 | Malic enzyme, NAD binding domain protein; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949. |
| EFD93825.1 protein network | https://string-db.org/network/699218.HMPREF0889_0219 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93826.1 protein network | https://string-db.org/network/699218.HMPREF0889_0220 | Identified by match to protein family HMM PF03601. |
| lysR-2 protein network | https://string-db.org/network/699218.HMPREF0889_0221 | LysR substrate binding domain protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. |
| EFD93828.1 protein network | https://string-db.org/network/699218.HMPREF0889_0222 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. |
| EFD93829.1 protein network | https://string-db.org/network/699218.HMPREF0889_0223 | Identified by match to protein family HMM PF05656. |
| EFD93830.1 protein network | https://string-db.org/network/699218.HMPREF0889_0224 | Transketolase, pyridine binding domain protein; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780. |
| EFD93831.1 protein network | https://string-db.org/network/699218.HMPREF0889_0225 | Transketolase, thiamine diphosphate binding domain protein; Identified by match to protein family HMM PF00456. |
| ksgA protein network | https://string-db.org/network/699218.HMPREF0889_0226 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...] |
| rnmV protein network | https://string-db.org/network/699218.HMPREF0889_0227 | Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. |
| EFD93834.1 protein network | https://string-db.org/network/699218.HMPREF0889_0228 | Aluminum resistance protein; Identified by match to protein family HMM PF06838. |
| miaA protein network | https://string-db.org/network/699218.HMPREF0889_0229 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(di [...] |
| EFD93836.1 protein network | https://string-db.org/network/699218.HMPREF0889_0230 | Identified by match to protein family HMM PF04445. |
| mutL protein network | https://string-db.org/network/699218.HMPREF0889_0231 | DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matc [...] |
| mutS protein network | https://string-db.org/network/699218.HMPREF0889_0232 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...] |
| miaB protein network | https://string-db.org/network/699218.HMPREF0889_0233 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) [...] |
| EFD93840.1 protein network | https://string-db.org/network/699218.HMPREF0889_0234 | Phosphoribosyl transferase domain protein; Identified by match to protein family HMM PF00156. |
| tatC protein network | https://string-db.org/network/699218.HMPREF0889_0235 | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in th [...] |
| tatA protein network | https://string-db.org/network/699218.HMPREF0889_0236 | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine m [...] |
| EFD93843.1 protein network | https://string-db.org/network/699218.HMPREF0889_0238 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. |
| EFD93844.1 protein network | https://string-db.org/network/699218.HMPREF0889_0239 | C4-dicarboxylate transporter/malic acid transport protein; Identified by match to protein family HMM PF03595. |
| truA protein network | https://string-db.org/network/699218.HMPREF0889_0240 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. |
| ecfT protein network | https://string-db.org/network/699218.HMPREF0889_0241 | Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessar [...] |
| ecfA protein network | https://string-db.org/network/699218.HMPREF0889_0242 | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the [...] |
| ecfA-2 protein network | https://string-db.org/network/699218.HMPREF0889_0243 | Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provi [...] |
| EFD93849.1 protein network | https://string-db.org/network/699218.HMPREF0889_0244 | Hypothetical protein. |
| nrdG protein network | https://string-db.org/network/699218.HMPREF0889_0245 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radic [...] |
| nrdD protein network | https://string-db.org/network/699218.HMPREF0889_0246 | Anaerobic ribonucleoside-triphosphate reductase; Identified by match to protein family HMM PF01228; match to protein family HMM PF03477; match to protein family HMM TIGR02487. |
| EFD93852.1 protein network | https://string-db.org/network/699218.HMPREF0889_0247 | Identified by match to protein family HMM PF00899. |
| EFD93853.1 protein network | https://string-db.org/network/699218.HMPREF0889_0248 | Identified by match to protein family HMM PF00903. |
| EFD93854.1 protein network | https://string-db.org/network/699218.HMPREF0889_0249 | Exonuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463. |
| sbcD protein network | https://string-db.org/network/699218.HMPREF0889_0250 | Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as [...] |
| EFD93856.1 protein network | https://string-db.org/network/699218.HMPREF0889_0251 | Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. |
| EFD93857.1 protein network | https://string-db.org/network/699218.HMPREF0889_0252 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93858.1 protein network | https://string-db.org/network/699218.HMPREF0889_0255 | Integral membrane protein, YjbE family; Identified by match to protein family HMM PF03741; match to protein family HMM TIGR03717. |
| EFD93859.1 protein network | https://string-db.org/network/699218.HMPREF0889_0256 | Putative glycolate oxidase, subunit GlcD; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913. |
| proC protein network | https://string-db.org/network/699218.HMPREF0889_0257 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. |
| EFD93861.1 protein network | https://string-db.org/network/699218.HMPREF0889_0258 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. |
| EFD93862.1 protein network | https://string-db.org/network/699218.HMPREF0889_0259 | NLPA lipoprotein. |
| EFD93863.1 protein network | https://string-db.org/network/699218.HMPREF0889_0260 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD93864.1 protein network | https://string-db.org/network/699218.HMPREF0889_0261 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. |
| EFD93865.1 protein network | https://string-db.org/network/699218.HMPREF0889_0262 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93866.1 protein network | https://string-db.org/network/699218.HMPREF0889_0263 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. |
| EFD93867.1 protein network | https://string-db.org/network/699218.HMPREF0889_0264 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. |
| EFD93868.1 protein network | https://string-db.org/network/699218.HMPREF0889_0265 | Positive regulator of sigma(E), RseC/MucC; Identified by match to protein family HMM PF04246. |
| EFD93869.1 protein network | https://string-db.org/network/699218.HMPREF0889_0266 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM [...] |
| EFD93870.1 protein network | https://string-db.org/network/699218.HMPREF0889_0267 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93871.1 protein network | https://string-db.org/network/699218.HMPREF0889_0268 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93872.1 protein network | https://string-db.org/network/699218.HMPREF0889_0269 | Hypothetical protein. |
| EFD93873.1 protein network | https://string-db.org/network/699218.HMPREF0889_0270 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93874.1 protein network | https://string-db.org/network/699218.HMPREF0889_0271 | Hypothetical protein. |
| EFD93875.1 protein network | https://string-db.org/network/699218.HMPREF0889_0272 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93876.1 protein network | https://string-db.org/network/699218.HMPREF0889_0273 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93877.1 protein network | https://string-db.org/network/699218.HMPREF0889_0274 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93878.1 protein network | https://string-db.org/network/699218.HMPREF0889_0275 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93879.1 protein network | https://string-db.org/network/699218.HMPREF0889_0276 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD93880.1 protein network | https://string-db.org/network/699218.HMPREF0889_0277 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93881.1 protein network | https://string-db.org/network/699218.HMPREF0889_0278 | Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464. |
| EFD93882.1 protein network | https://string-db.org/network/699218.HMPREF0889_0279 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93883.1 protein network | https://string-db.org/network/699218.HMPREF0889_0280 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93884.1 protein network | https://string-db.org/network/699218.HMPREF0889_0281 | Hypothetical protein. |
| EFD93885.1 protein network | https://string-db.org/network/699218.HMPREF0889_0282 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93886.1 protein network | https://string-db.org/network/699218.HMPREF0889_0283 | Hypothetical protein. |
| EFD93887.1 protein network | https://string-db.org/network/699218.HMPREF0889_0284 | Hypothetical protein. |
| EFD93888.1 protein network | https://string-db.org/network/699218.HMPREF0889_0285 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93889.1 protein network | https://string-db.org/network/699218.HMPREF0889_0286 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93890.1 protein network | https://string-db.org/network/699218.HMPREF0889_0287 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93891.1 protein network | https://string-db.org/network/699218.HMPREF0889_0288 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93892.1 protein network | https://string-db.org/network/699218.HMPREF0889_0289 | Hypothetical protein. |
| EFD93893.1 protein network | https://string-db.org/network/699218.HMPREF0889_0290 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93894.1 protein network | https://string-db.org/network/699218.HMPREF0889_0291 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93895.1 protein network | https://string-db.org/network/699218.HMPREF0889_0292 | Hypothetical protein. |
| EFD93896.1 protein network | https://string-db.org/network/699218.HMPREF0889_0293 | Hypothetical protein. |
| EFD93897.1 protein network | https://string-db.org/network/699218.HMPREF0889_0294 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93898.1 protein network | https://string-db.org/network/699218.HMPREF0889_0295 | Ribbon-helix-helix protein, CopG family; Identified by match to protein family HMM PF01402. |
| EFD93899.1 protein network | https://string-db.org/network/699218.HMPREF0889_0296 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93900.1 protein network | https://string-db.org/network/699218.HMPREF0889_0297 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93902.1 protein network | https://string-db.org/network/699218.HMPREF0889_0298 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93901.1 protein network | https://string-db.org/network/699218.HMPREF0889_0299 | Hypothetical protein; Identified by glimmer; putative. |
| rusA protein network | https://string-db.org/network/699218.HMPREF0889_0300 | Crossover junction endodeoxyribonuclease RusA; Identified by match to protein family HMM PF05866. |
| EFD93904.1 protein network | https://string-db.org/network/699218.HMPREF0889_0301 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. |
| EFD93905.1 protein network | https://string-db.org/network/699218.HMPREF0889_0302 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93906.1 protein network | https://string-db.org/network/699218.HMPREF0889_0303 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93907.1 protein network | https://string-db.org/network/699218.HMPREF0889_0304 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93908.1 protein network | https://string-db.org/network/699218.HMPREF0889_0305 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93909.1 protein network | https://string-db.org/network/699218.HMPREF0889_0306 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93910.1 protein network | https://string-db.org/network/699218.HMPREF0889_0307 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. |
| EFD93911.1 protein network | https://string-db.org/network/699218.HMPREF0889_0308 | Hypothetical protein. |
| EFD93912.1 protein network | https://string-db.org/network/699218.HMPREF0889_0309 | Erf family protein; Identified by match to protein family HMM PF04404. |
| EFD93913.1 protein network | https://string-db.org/network/699218.HMPREF0889_0310 | Siphovirus Gp157; Identified by match to protein family HMM PF05565. |
| mazG protein network | https://string-db.org/network/699218.HMPREF0889_0311 | MazG nucleotide pyrophosphohydrolase domain protein; Identified by match to protein family HMM PF03819. |
| EFD93915.1 protein network | https://string-db.org/network/699218.HMPREF0889_0312 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93916.1 protein network | https://string-db.org/network/699218.HMPREF0889_0313 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93917.1 protein network | https://string-db.org/network/699218.HMPREF0889_0314 | Hypothetical protein. |
| EFD93918.1 protein network | https://string-db.org/network/699218.HMPREF0889_0315 | Hypothetical protein. |
| EFD93919.1 protein network | https://string-db.org/network/699218.HMPREF0889_0316 | Hypothetical protein. |
| EFD93920.1 protein network | https://string-db.org/network/699218.HMPREF0889_0317 | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF00717; match to protein family HMM PF01381. |
| EFD93921.1 protein network | https://string-db.org/network/699218.HMPREF0889_0318 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. |
| EFD93922.1 protein network | https://string-db.org/network/699218.HMPREF0889_0319 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93923.1 protein network | https://string-db.org/network/699218.HMPREF0889_0320 | Hypothetical protein. |
| EFD93924.1 protein network | https://string-db.org/network/699218.HMPREF0889_0321 | Identified by match to protein family HMM PF00395. |
| EFD93925.1 protein network | https://string-db.org/network/699218.HMPREF0889_0322 | L-asparaginase, type II; Identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; Belongs to the asparaginase 1 family. |
| EFD93926.1 protein network | https://string-db.org/network/699218.HMPREF0889_0323 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93927.1 protein network | https://string-db.org/network/699218.HMPREF0889_0324 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93928.1 protein network | https://string-db.org/network/699218.HMPREF0889_0325 | Hypothetical protein. |
| nfeD protein network | https://string-db.org/network/699218.HMPREF0889_0326 | Identified by match to protein family HMM PF01957. |
| EFD93930.1 protein network | https://string-db.org/network/699218.HMPREF0889_0327 | Hypothetical protein. |
| EFD93931.1 protein network | https://string-db.org/network/699218.HMPREF0889_0328 | Hypothetical protein. |
| trpS protein network | https://string-db.org/network/699218.HMPREF0889_0329 | tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. |
| EFD93933.1 protein network | https://string-db.org/network/699218.HMPREF0889_0331 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. |
| EFD93934.1 protein network | https://string-db.org/network/699218.HMPREF0889_0332 | Hypothetical protein; Identified by glimmer; putative. |
| rpsD protein network | https://string-db.org/network/699218.HMPREF0889_0333 | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. |
| EFD93936.1 protein network | https://string-db.org/network/699218.HMPREF0889_0334 | Hypothetical protein. |
| EFD93937.1 protein network | https://string-db.org/network/699218.HMPREF0889_0335 | Transporter, lactate permease (LctP) family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. |
| EFD93938.1 protein network | https://string-db.org/network/699218.HMPREF0889_0336 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93939.1 protein network | https://string-db.org/network/699218.HMPREF0889_0337 | Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporte [...] |
| ileS protein network | https://string-db.org/network/699218.HMPREF0889_0338 | isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such err [...] |
| agcS-2 protein network | https://string-db.org/network/699218.HMPREF0889_0340 | Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835. |
| EFD93942.1 protein network | https://string-db.org/network/699218.HMPREF0889_0341 | Hypothetical protein; Identified by glimmer; putative. |
| cobB-2 protein network | https://string-db.org/network/699218.HMPREF0889_0342 | Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin fam [...] |
| mutS2 protein network | https://string-db.org/network/699218.HMPREF0889_0343 | Recombination and DNA strand exchange inhibitor protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial [...] |
| EFD93945.1 protein network | https://string-db.org/network/699218.HMPREF0889_0344 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. |
| EFD93946.1 protein network | https://string-db.org/network/699218.HMPREF0889_0345 | Hypothetical protein. |
| coaD protein network | https://string-db.org/network/699218.HMPREF0889_0346 | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial Co [...] |
| EFD93948.1 protein network | https://string-db.org/network/699218.HMPREF0889_0347 | RNA methyltransferase, RsmD family; Identified by match to protein family HMM PF03602. |
| plsY protein network | https://string-db.org/network/699218.HMPREF0889_0348 | Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). Th [...] |
| der protein network | https://string-db.org/network/699218.HMPREF0889_0349 | Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA ( [...] |
| ispH protein network | https://string-db.org/network/699218.HMPREF0889_0350 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...] |
| EFD93952.1 protein network | https://string-db.org/network/699218.HMPREF0889_0351 | Acyltransferase; Identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530. |
| cmk protein network | https://string-db.org/network/699218.HMPREF0889_0352 | Cytidylate kinase; Identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017. |
| EFD93954.1 protein network | https://string-db.org/network/699218.HMPREF0889_0353 | Identified by match to protein family HMM PF00890; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF079 [...] |
| EFD93955.1 protein network | https://string-db.org/network/699218.HMPREF0889_0354 | Pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA [...] |
| scpB protein network | https://string-db.org/network/699218.HMPREF0889_0355 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA awa [...] |
| EFD93957.1 protein network | https://string-db.org/network/699218.HMPREF0889_0356 | ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into bot [...] |
| rny protein network | https://string-db.org/network/699218.HMPREF0889_0362 | YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. |
| EFD93959.1 protein network | https://string-db.org/network/699218.HMPREF0889_0363 | Hypothetical protein; Modulates RecA activity; Belongs to the RecX family. |
| recA protein network | https://string-db.org/network/699218.HMPREF0889_0364 | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...] |
| cinA protein network | https://string-db.org/network/699218.HMPREF0889_0365 | Competence/damage-inducible domain protein CinA; Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein fa [...] |
| rimO protein network | https://string-db.org/network/699218.HMPREF0889_0366 | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. |
| EFD93963.1 protein network | https://string-db.org/network/699218.HMPREF0889_0367 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93964.1 protein network | https://string-db.org/network/699218.HMPREF0889_0368 | Hypothetical protein. |
| spoIIIE protein network | https://string-db.org/network/699218.HMPREF0889_0369 | Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. |
| EFD93966.1 protein network | https://string-db.org/network/699218.HMPREF0889_0370 | Recombination factor protein RarA; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. |
| tkt protein network | https://string-db.org/network/699218.HMPREF0889_0372 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. |
| EFD93968.1 protein network | https://string-db.org/network/699218.HMPREF0889_0373 | Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Identified by match to protein family HMM PF03279. |
| lpxD protein network | https://string-db.org/network/699218.HMPREF0889_0374 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lip [...] |
| EFD93970.1 protein network | https://string-db.org/network/699218.HMPREF0889_0375 | Outer membrane protein; Identified by match to protein family HMM PF03938. |
| EFD93971.1 protein network | https://string-db.org/network/699218.HMPREF0889_0376 | Outer membrane protein. |
| EFD93972.1 protein network | https://string-db.org/network/699218.HMPREF0889_0377 | Outer membrane protein; Identified by match to protein family HMM PF03938. |
| EFD93973.1 protein network | https://string-db.org/network/699218.HMPREF0889_0378 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93974.1 protein network | https://string-db.org/network/699218.HMPREF0889_0379 | Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244. |
| EFD93975.1 protein network | https://string-db.org/network/699218.HMPREF0889_0380 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93976.1 protein network | https://string-db.org/network/699218.HMPREF0889_0381 | Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to t [...] |
| EFD93977.1 protein network | https://string-db.org/network/699218.HMPREF0889_0382 | Identified by match to protein family HMM PF04357. |
| EFD93978.1 protein network | https://string-db.org/network/699218.HMPREF0889_0383 | Outer membrane efflux protein; Identified by match to protein family HMM PF02321. |
| EFD93979.1 protein network | https://string-db.org/network/699218.HMPREF0889_0384 | Putative virulence factor Mce family protein; Identified by match to protein family HMM PF02470. |
| EFD93980.1 protein network | https://string-db.org/network/699218.HMPREF0889_0385 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD93981.1 protein network | https://string-db.org/network/699218.HMPREF0889_0386 | Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; Belongs to the MlaE permease family. |
| EFD93982.1 protein network | https://string-db.org/network/699218.HMPREF0889_0387 | Hypothetical protein. |
| EFD93983.1 protein network | https://string-db.org/network/699218.HMPREF0889_0388 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93984.1 protein network | https://string-db.org/network/699218.HMPREF0889_0389 | Cell shape determining protein, MreB/Mrl family; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904. |
| murA protein network | https://string-db.org/network/699218.HMPREF0889_0390 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. |
| EFD93986.1 protein network | https://string-db.org/network/699218.HMPREF0889_0391 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93987.1 protein network | https://string-db.org/network/699218.HMPREF0889_0392 | Identified by match to protein family HMM PF00300. |
| nifJ-2 protein network | https://string-db.org/network/699218.HMPREF0889_0393 | Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. |
| EFD93989.1 protein network | https://string-db.org/network/699218.HMPREF0889_0394 | Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242. |
| folD protein network | https://string-db.org/network/699218.HMPREF0889_0395 | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of [...] |
| EFD93991.1 protein network | https://string-db.org/network/699218.HMPREF0889_0396 | Penicillin-binding protein, transpeptidase domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793. |
| EFD93992.1 protein network | https://string-db.org/network/699218.HMPREF0889_0397 | tRNA nucleotidyltransferase/poly(A) polymerase family protein; Identified by match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. |
| EFD93993.1 protein network | https://string-db.org/network/699218.HMPREF0889_0398 | Putative cob(I)yrinic acid a,c-diamide adenosyltransferase; Identified by match to protein family HMM PF02572. |
| EFD93994.1 protein network | https://string-db.org/network/699218.HMPREF0889_0399 | Cation diffusion facilitator family transporter; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; Belongs to the cation diffusion facilitator (CDF) transp [...] |
| EFD93995.1 protein network | https://string-db.org/network/699218.HMPREF0889_0401 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93996.1 protein network | https://string-db.org/network/699218.HMPREF0889_0402 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93997.1 protein network | https://string-db.org/network/699218.HMPREF0889_0403 | Hypothetical protein. |
| EFD93998.1 protein network | https://string-db.org/network/699218.HMPREF0889_0408 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. |
| EFD93450.1 protein network | https://string-db.org/network/699218.HMPREF0889_0409 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF0 [...] |
| EFD93451.1 protein network | https://string-db.org/network/699218.HMPREF0889_0410 | Hypothetical protein. |
| EFD93452.1 protein network | https://string-db.org/network/699218.HMPREF0889_0411 | FAH family protein; Identified by match to protein family HMM PF01557. |
| glnS protein network | https://string-db.org/network/699218.HMPREF0889_0412 | glutamine--tRNA ligase; Identified by match to protein family HMM PF00749; match to protein family HMM PF03950; match to protein family HMM TIGR00440. |
| EFD93454.1 protein network | https://string-db.org/network/699218.HMPREF0889_0413 | Hypothetical protein. |
| maf protein network | https://string-db.org/network/699218.HMPREF0889_0414 | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nu [...] |
| EFD93456.1 protein network | https://string-db.org/network/699218.HMPREF0889_0415 | Putative DNA repair protein RadC; Identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family. |
| EFD93457.1 protein network | https://string-db.org/network/699218.HMPREF0889_0416 | Dehydrogenase, FMN-dependent; Identified by match to protein family HMM PF01070. |
| EFD93458.1 protein network | https://string-db.org/network/699218.HMPREF0889_0417 | six-Cys-in-45 modification radical SAM protein; Identified by match to protein family HMM PF04055. |
| EFD93459.1 protein network | https://string-db.org/network/699218.HMPREF0889_0418 | Hypothetical protein; Identified by glimmer; putative. |
| sufC protein network | https://string-db.org/network/699218.HMPREF0889_0419 | FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978. |
| sufB protein network | https://string-db.org/network/699218.HMPREF0889_0420 | FeS assembly protein SufB; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980. |
| EFD93462.1 protein network | https://string-db.org/network/699218.HMPREF0889_0421 | SufB/sufD domain protein; Identified by match to protein family HMM PF01458. |
| sufS protein network | https://string-db.org/network/699218.HMPREF0889_0422 | Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. |
| EFD93464.1 protein network | https://string-db.org/network/699218.HMPREF0889_0423 | SUF system FeS assembly protein, NifU family; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994. |
| pflB protein network | https://string-db.org/network/699218.HMPREF0889_0424 | Formate C-acetyltransferase; Identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255. |
| pflA protein network | https://string-db.org/network/699218.HMPREF0889_0425 | Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavo [...] |
| pepA protein network | https://string-db.org/network/699218.HMPREF0889_0426 | Cytosol aminopeptidase family, catalytic domain protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal a [...] |
| EFD93468.1 protein network | https://string-db.org/network/699218.HMPREF0889_0427 | PHP domain protein; Identified by match to protein family HMM PF02811. |
| EFD93469.1 protein network | https://string-db.org/network/699218.HMPREF0889_0428 | Hypothetical protein. |
| EFD93627.1 protein network | https://string-db.org/network/699218.HMPREF0889_0429 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. |
| EFD93628.1 protein network | https://string-db.org/network/699218.HMPREF0889_0430 | Hypothetical protein; Identified by glimmer; putative. |
| metF protein network | https://string-db.org/network/699218.HMPREF0889_0431 | Methylenetetrahydrofolate reductase (NAD(P)H); Identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; Belongs to the methylenetetrahydrofolate reductase family. |
| EFD93630.1 protein network | https://string-db.org/network/699218.HMPREF0889_0432 | Lipoprotein, YaeC family; Identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363; Belongs to the nlpA lipoprotein family. |
| EFD93631.1 protein network | https://string-db.org/network/699218.HMPREF0889_0435 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD93632.1 protein network | https://string-db.org/network/699218.HMPREF0889_0436 | Cobalt transport protein; Identified by match to protein family HMM PF02361. |
| EFD93633.1 protein network | https://string-db.org/network/699218.HMPREF0889_0437 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD93634.1 protein network | https://string-db.org/network/699218.HMPREF0889_0438 | Hypothetical protein. |
| EFD93635.1 protein network | https://string-db.org/network/699218.HMPREF0889_0439 | Aminotransferase, class IV; Identified by match to protein family HMM PF01063. |
| pabB protein network | https://string-db.org/network/699218.HMPREF0889_0440 | Aminodeoxychorismate synthase, component I; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene [...] |
| EFD93637.1 protein network | https://string-db.org/network/699218.HMPREF0889_0441 | Glutamine amidotransferase, class I; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566. |
| EFD93638.1 protein network | https://string-db.org/network/699218.HMPREF0889_0442 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93639.1 protein network | https://string-db.org/network/699218.HMPREF0889_0444 | Alcohol dehydrogenase, iron-dependent; Identified by match to protein family HMM PF00465. |
| ybaK protein network | https://string-db.org/network/699218.HMPREF0889_0445 | Identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. |
| EFD93641.1 protein network | https://string-db.org/network/699218.HMPREF0889_0446 | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. |
| EFD93642.1 protein network | https://string-db.org/network/699218.HMPREF0889_0447 | Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases f [...] |
| EFD94225.1 protein network | https://string-db.org/network/699218.HMPREF0889_0450 | Identified by match to protein family HMM PF02588. |
| ispE protein network | https://string-db.org/network/699218.HMPREF0889_0451 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. |
| EFD94227.1 protein network | https://string-db.org/network/699218.HMPREF0889_0452 | FCD domain protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. |
| EFD94228.1 protein network | https://string-db.org/network/699218.HMPREF0889_0453 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94229.1 protein network | https://string-db.org/network/699218.HMPREF0889_0454 | Putative glycolate oxidase, subunit GlcD; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913. |
| metA protein network | https://string-db.org/network/699218.HMPREF0889_0455 | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. |
| EFD94231.1 protein network | https://string-db.org/network/699218.HMPREF0889_0456 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; ma [...] |
| EFD94233.1 protein network | https://string-db.org/network/699218.HMPREF0889_0459 | Oligopeptide transporter, OPT family; Identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733. |
| potE protein network | https://string-db.org/network/699218.HMPREF0889_0460 | Putrescine-ornithine antiporter; Identified by match to protein family HMM PF00324. |
| EFD94235.1 protein network | https://string-db.org/network/699218.HMPREF0889_0461 | acetyl-CoA C-acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02801; match to protein family HMM PF02803; match to protein family HMM TIGR01930; [...] |
| EFD94236.1 protein network | https://string-db.org/network/699218.HMPREF0889_0462 | Hypothetical protein; Identified by glimmer; putative. |
| infC protein network | https://string-db.org/network/699218.HMPREF0889_0464 | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enha [...] |
| rpmI protein network | https://string-db.org/network/699218.HMPREF0889_0465 | Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family. |
| rplT protein network | https://string-db.org/network/699218.HMPREF0889_0466 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing function [...] |
| EFD94240.1 protein network | https://string-db.org/network/699218.HMPREF0889_0467 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94241.1 protein network | https://string-db.org/network/699218.HMPREF0889_0468 | Hep/Hag repeat protein; Identified by match to protein family HMM PF05658; match to protein family HMM PF05662. |
| EFD94242.1 protein network | https://string-db.org/network/699218.HMPREF0889_0469 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. |
| tonB-3 protein network | https://string-db.org/network/699218.HMPREF0889_0470 | TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. |
| EFD94244.1 protein network | https://string-db.org/network/699218.HMPREF0889_0471 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94245.1 protein network | https://string-db.org/network/699218.HMPREF0889_0472 | Molybdenum cofactor synthesis domain protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. |
| EFD94246.1 protein network | https://string-db.org/network/699218.HMPREF0889_0473 | Putative alpha-ribazole phosphatase; Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. |
| EFD94247.1 protein network | https://string-db.org/network/699218.HMPREF0889_0474 | Pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA [...] |
| EFD94248.1 protein network | https://string-db.org/network/699218.HMPREF0889_0475 | Creatinase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321. |
| efp protein network | https://string-db.org/network/699218.HMPREF0889_0476 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functi [...] |
| EFD94250.1 protein network | https://string-db.org/network/699218.HMPREF0889_0477 | Identified by match to protein family HMM PF03780. |
| EFD94251.1 protein network | https://string-db.org/network/699218.HMPREF0889_0478 | Hypothetical protein; Identified by glimmer; putative. |
| nusB protein network | https://string-db.org/network/699218.HMPREF0889_0479 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator seque [...] |
| EFD94253.1 protein network | https://string-db.org/network/699218.HMPREF0889_0480 | Metallohydrolase, glycoprotease/Kae1 family. |
| xseA protein network | https://string-db.org/network/699218.HMPREF0889_0481 | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...] |
| xseB protein network | https://string-db.org/network/699218.HMPREF0889_0482 | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...] |
| EFD94256.1 protein network | https://string-db.org/network/699218.HMPREF0889_0483 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. |
| rrmJ protein network | https://string-db.org/network/699218.HMPREF0889_0484 | Ribosomal RNA large subunit methyltransferase J; Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. |
| nadK protein network | https://string-db.org/network/699218.HMPREF0889_0485 | NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydr [...] |
| EFD94259.1 protein network | https://string-db.org/network/699218.HMPREF0889_0486 | Putative rRNA methylase; Identified by match to protein family HMM PF06962. |
| argR protein network | https://string-db.org/network/699218.HMPREF0889_0487 | Arginine repressor; Regulates arginine biosynthesis genes. |
| recN protein network | https://string-db.org/network/699218.HMPREF0889_0488 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. |
| dapB protein network | https://string-db.org/network/699218.HMPREF0889_0489 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. |
| asd protein network | https://string-db.org/network/699218.HMPREF0889_0490 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...] |
| dapA protein network | https://string-db.org/network/699218.HMPREF0889_0491 | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). |
| EFD94265.1 protein network | https://string-db.org/network/699218.HMPREF0889_0492 | Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403. |
| EFD94266.1 protein network | https://string-db.org/network/699218.HMPREF0889_0493 | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. |
| EFD94267.1 protein network | https://string-db.org/network/699218.HMPREF0889_0494 | Putative diaminopimelate decarboxylase; Identified by match to protein family HMM PF00278; match to protein family HMM PF02784. |
| EFD94268.1 protein network | https://string-db.org/network/699218.HMPREF0889_0495 | HTH domain protein; Identified by match to protein family HMM PF02829; match to protein family HMM PF08279. |
| EFD94269.1 protein network | https://string-db.org/network/699218.HMPREF0889_0496 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. |
| EFD93449.1 protein network | https://string-db.org/network/699218.HMPREF0889_0497 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. |
| deoR protein network | https://string-db.org/network/699218.HMPREF0889_0499 | Deoxyribonucleoside regulator; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF04198. |
| glpK protein network | https://string-db.org/network/699218.HMPREF0889_0500 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. |
| EFD94686.1 protein network | https://string-db.org/network/699218.HMPREF0889_0501 | MIP family channel protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00230; Belongs to the MIP/aquapori [...] |
| EFD94443.1 protein network | https://string-db.org/network/699218.HMPREF0889_0502 | Flavodoxin; Identified by match to protein family HMM PF00258. |
| EFD94444.1 protein network | https://string-db.org/network/699218.HMPREF0889_0503 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. |
| maoC protein network | https://string-db.org/network/699218.HMPREF0889_0504 | Identified by match to protein family HMM PF01575. |
| EFD94446.1 protein network | https://string-db.org/network/699218.HMPREF0889_0505 | butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. |
| EFD94447.1 protein network | https://string-db.org/network/699218.HMPREF0889_0506 | 2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050. |
| EFD94448.1 protein network | https://string-db.org/network/699218.HMPREF0889_0507 | 2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050. |
| hgdC protein network | https://string-db.org/network/699218.HMPREF0889_0508 | Putative benzoyl-CoA reductase, subunit D; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241. |
| EFD94450.1 protein network | https://string-db.org/network/699218.HMPREF0889_0509 | Glyoxalase family protein. |
| EFD94451.1 protein network | https://string-db.org/network/699218.HMPREF0889_0510 | CoA transferase; Identified by match to protein family HMM PF01144; Belongs to the 3-oxoacid CoA-transferase family. |
| aroD protein network | https://string-db.org/network/699218.HMPREF0889_0511 | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroqui [...] |
| EFD94453.1 protein network | https://string-db.org/network/699218.HMPREF0889_0512 | Identified by match to protein family HMM PF04463. |
| EFD94454.1 protein network | https://string-db.org/network/699218.HMPREF0889_0513 | Acetolactate synthase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family. |
| EFD94455.1 protein network | https://string-db.org/network/699218.HMPREF0889_0514 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94456.1 protein network | https://string-db.org/network/699218.HMPREF0889_0515 | Hypothetical protein. |
| EFD94457.1 protein network | https://string-db.org/network/699218.HMPREF0889_0516 | Hypothetical protein. |
| gcdC protein network | https://string-db.org/network/699218.HMPREF0889_0517 | glutaconyl-CoA decarboxylase subunit gamma; Identified by match to protein family HMM PF00364. |
| EFD94459.1 protein network | https://string-db.org/network/699218.HMPREF0889_0518 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD94460.1 protein network | https://string-db.org/network/699218.HMPREF0889_0519 | Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039. |
| EFD94461.1 protein network | https://string-db.org/network/699218.HMPREF0889_0521 | Methyltransferase domain protein; Identified by match to protein family HMM PF01170; match to protein family HMM PF08241; Belongs to the N(4)/N(6)-methyltransferase family. |
| EFD94462.1 protein network | https://string-db.org/network/699218.HMPREF0889_0522 | DpmII restriction endonuclease; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. |
| dam protein network | https://string-db.org/network/699218.HMPREF0889_0523 | DNA adenine methylase; Identified by match to protein family HMM PF02086; match to protein family HMM TIGR00571. |
| hydE protein network | https://string-db.org/network/699218.HMPREF0889_0524 | Iron-only hydrogenase maturation rSAM protein HydE; Identified by match to protein family HMM PF04055. |
| uppP protein network | https://string-db.org/network/699218.HMPREF0889_0525 | Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. |
| glpX protein network | https://string-db.org/network/699218.HMPREF0889_0526 | Fructose-1,6-bisphosphatase, class II; Identified by match to protein family HMM PF03320; match to protein family HMM TIGR00330. |
| serS protein network | https://string-db.org/network/699218.HMPREF0889_0527 | serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further co [...] |
| EFD94468.1 protein network | https://string-db.org/network/699218.HMPREF0889_0528 | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. |
| serA protein network | https://string-db.org/network/699218.HMPREF0889_0529 | Phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; [...] |
| EFD94470.1 protein network | https://string-db.org/network/699218.HMPREF0889_0530 | Putative phosphoserine transaminase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| EFD94471.1 protein network | https://string-db.org/network/699218.HMPREF0889_0531 | Putative phosphoserine transaminase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| EFD94472.1 protein network | https://string-db.org/network/699218.HMPREF0889_0533 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94473.1 protein network | https://string-db.org/network/699218.HMPREF0889_0534 | Hypothetical protein. |
| pyrE protein network | https://string-db.org/network/699218.HMPREF0889_0535 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). |
| pyrF protein network | https://string-db.org/network/699218.HMPREF0889_0536 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamil [...] |
| EFD94476.1 protein network | https://string-db.org/network/699218.HMPREF0889_0537 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. |
| EFD94477.1 protein network | https://string-db.org/network/699218.HMPREF0889_0538 | Putative permease; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. |
| EFD94478.1 protein network | https://string-db.org/network/699218.HMPREF0889_0539 | Putative cell division protein FtsW; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. |
| trmB protein network | https://string-db.org/network/699218.HMPREF0889_0540 | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. |
| EFD94480.1 protein network | https://string-db.org/network/699218.HMPREF0889_0541 | Identified by match to protein family HMM PF06107. |
| EFD94481.1 protein network | https://string-db.org/network/699218.HMPREF0889_0542 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94482.1 protein network | https://string-db.org/network/699218.HMPREF0889_0543 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94483.1 protein network | https://string-db.org/network/699218.HMPREF0889_0544 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94484.1 protein network | https://string-db.org/network/699218.HMPREF0889_0545 | Rubredoxin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. |
| EFD94485.1 protein network | https://string-db.org/network/699218.HMPREF0889_0546 | Hypothetical protein. |
| panB protein network | https://string-db.org/network/699218.HMPREF0889_0547 | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to [...] |
| EFD94487.1 protein network | https://string-db.org/network/699218.HMPREF0889_0548 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94488.1 protein network | https://string-db.org/network/699218.HMPREF0889_0550 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94490.1 protein network | https://string-db.org/network/699218.HMPREF0889_0551 | Serine-type D-Ala-D-Ala carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. |
| aroK protein network | https://string-db.org/network/699218.HMPREF0889_0552 | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. |
| EFD94492.1 protein network | https://string-db.org/network/699218.HMPREF0889_0553 | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. |
| EFD94493.1 protein network | https://string-db.org/network/699218.HMPREF0889_0554 | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842. |
| aroC protein network | https://string-db.org/network/699218.HMPREF0889_0555 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...] |
| aroA protein network | https://string-db.org/network/699218.HMPREF0889_0556 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...] |
| aroB protein network | https://string-db.org/network/699218.HMPREF0889_0557 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). |
| EFD94497.1 protein network | https://string-db.org/network/699218.HMPREF0889_0558 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. |
| aroF protein network | https://string-db.org/network/699218.HMPREF0889_0559 | 3-deoxy-7-phosphoheptulonate synthase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361. |
| EFD94499.1 protein network | https://string-db.org/network/699218.HMPREF0889_0560 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. |
| EFD94500.1 protein network | https://string-db.org/network/699218.HMPREF0889_0561 | Putative selenium-dependent hydroxylase accessory protein YqeC; Identified by match to protein family HMM TIGR03172. |
| EFD94501.1 protein network | https://string-db.org/network/699218.HMPREF0889_0562 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94502.1 protein network | https://string-db.org/network/699218.HMPREF0889_0563 | Hypothetical protein; Identified by glimmer; putative. |
| crcB protein network | https://string-db.org/network/699218.HMPREF0889_0564 | Putative protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. |
| EFD94504.1 protein network | https://string-db.org/network/699218.HMPREF0889_0565 | Hypothetical protein; Identified by glimmer; putative. |
| sdaAA protein network | https://string-db.org/network/699218.HMPREF0889_0566 | L-serine dehydratase, iron-sulfur-dependent, alpha subunit; Identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; Belongs to the iron-sulfur dependent L-serine [...] |
| sdaAB protein network | https://string-db.org/network/699218.HMPREF0889_0567 | L-serine dehydratase, iron-sulfur-dependent, beta subunit; Identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; Belongs t [...] |
| addA protein network | https://string-db.org/network/699218.HMPREF0889_0568 | ATP-dependent nuclease subunit A; ATP-dependent DNA helicase. |
| EFD94508.1 protein network | https://string-db.org/network/699218.HMPREF0889_0569 | Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase. |
| EFD94509.1 protein network | https://string-db.org/network/699218.HMPREF0889_0570 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94510.1 protein network | https://string-db.org/network/699218.HMPREF0889_0571 | ADP-ribosylglycohydrolase; Identified by match to protein family HMM PF03747. |
| EFD94511.1 protein network | https://string-db.org/network/699218.HMPREF0889_0572 | Cation diffusion facilitator family transporter; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. |
| EFD94512.1 protein network | https://string-db.org/network/699218.HMPREF0889_0573 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94513.1 protein network | https://string-db.org/network/699218.HMPREF0889_0574 | Transporter, small conductance mechanosensitive ion channel MscS family protein; Identified by match to protein family HMM PF00924. |
| EFD94514.1 protein network | https://string-db.org/network/699218.HMPREF0889_0575 | Acetyl-CoA hydrolase/transferase; Identified by match to protein family HMM PF02550. |
| EFD94515.1 protein network | https://string-db.org/network/699218.HMPREF0889_0576 | Indolepyruvate oxidoreductase subunit beta; Identified by match to protein family HMM PF01558. |
| iorA protein network | https://string-db.org/network/699218.HMPREF0889_0577 | Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. |
| EFD94517.1 protein network | https://string-db.org/network/699218.HMPREF0889_0578 | Sigma-54 interaction domain protein; Identified by match to protein family HMM PF00158. |
| tonB-4 protein network | https://string-db.org/network/699218.HMPREF0889_0579 | TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. |
| stp protein network | https://string-db.org/network/699218.HMPREF0889_0580 | Serine transporter. |
| tuf protein network | https://string-db.org/network/699218.HMPREF0889_0581 | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. |
| pyc protein network | https://string-db.org/network/699218.HMPREF0889_0587 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate [...] |
| EFD94522.1 protein network | https://string-db.org/network/699218.HMPREF0889_0588 | Hypothetical protein. |
| EFD94523.1 protein network | https://string-db.org/network/699218.HMPREF0889_0589 | Hypothetical protein. |
| EFD94524.1 protein network | https://string-db.org/network/699218.HMPREF0889_0590 | Transcriptional regulator, LacI family; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. |
| purB protein network | https://string-db.org/network/699218.HMPREF0889_0591 | Adenylosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. |
| EFD94526.1 protein network | https://string-db.org/network/699218.HMPREF0889_0592 | Hypothetical protein. |
| EFD94527.1 protein network | https://string-db.org/network/699218.HMPREF0889_0593 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266. |
| EFD94528.1 protein network | https://string-db.org/network/699218.HMPREF0889_0594 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94529.1 protein network | https://string-db.org/network/699218.HMPREF0889_0595 | Identified by match to protein family HMM PF07751. |
| mgtA protein network | https://string-db.org/network/699218.HMPREF0889_0599 | Magnesium-importing ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; mat [...] |
| EFD94531.1 protein network | https://string-db.org/network/699218.HMPREF0889_0600 | Transcriptional regulatory protein, C-terminal domain protein; Identified by match to protein family HMM PF00486. |
| mgtA-2 protein network | https://string-db.org/network/699218.HMPREF0889_0601 | Magnesium-importing ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; mat [...] |
| EFD94533.1 protein network | https://string-db.org/network/699218.HMPREF0889_0602 | Arylsulfatase; Identified by match to protein family HMM PF00884. |
| trpA protein network | https://string-db.org/network/699218.HMPREF0889_0603 | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. |
| trpB protein network | https://string-db.org/network/699218.HMPREF0889_0604 | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. |
| trpF protein network | https://string-db.org/network/699218.HMPREF0889_0605 | N-(5'phosphoribosyl)anthranilate isomerase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene [...] |
| trpC protein network | https://string-db.org/network/699218.HMPREF0889_0606 | Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218; Belongs to the TrpC family. |
| EFD94538.1 protein network | https://string-db.org/network/699218.HMPREF0889_0607 | Putative anthranilate phosphoribosyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current [...] |
| EFD94539.1 protein network | https://string-db.org/network/699218.HMPREF0889_0608 | Putative anthranilate phosphoribosyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current [...] |
| EFD94540.1 protein network | https://string-db.org/network/699218.HMPREF0889_0609 | Glutamine amidotransferase, class I; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566. |
| EFD94541.1 protein network | https://string-db.org/network/699218.HMPREF0889_0610 | Chorismate binding enzyme; Identified by match to protein family HMM PF00425; match to protein family HMM PF04715. |
| EFD94542.1 protein network | https://string-db.org/network/699218.HMPREF0889_0619 | Phage replisome organizer N-terminal domain protein; Identified by match to protein family HMM TIGR01714. |
| EFD94543.1 protein network | https://string-db.org/network/699218.HMPREF0889_0620 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94544.1 protein network | https://string-db.org/network/699218.HMPREF0889_0621 | Hypothetical protein. |
| EFD94545.1 protein network | https://string-db.org/network/699218.HMPREF0889_0622 | ACT domain protein; Identified by match to protein family HMM PF01842; match to protein family HMM PF02308. |
| EFD94546.1 protein network | https://string-db.org/network/699218.HMPREF0889_0623 | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366; match to protein family HMM PF09335. |
| EFD94547.1 protein network | https://string-db.org/network/699218.HMPREF0889_0624 | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. |
| EFD94548.1 protein network | https://string-db.org/network/699218.HMPREF0889_0625 | Hypothetical protein. |
| EFD94549.1 protein network | https://string-db.org/network/699218.HMPREF0889_0626 | Hypothetical protein. |
| EFD94550.1 protein network | https://string-db.org/network/699218.HMPREF0889_0627 | Class II glutamine amidotransferase; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF048 [...] |
| EFD94551.1 protein network | https://string-db.org/network/699218.HMPREF0889_0628 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94552.1 protein network | https://string-db.org/network/699218.HMPREF0889_0629 | Putative membrane protein; Identified by match to protein family HMM PF00892. |
| EFD94553.1 protein network | https://string-db.org/network/699218.HMPREF0889_0630 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD94554.1 protein network | https://string-db.org/network/699218.HMPREF0889_0631 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD94555.1 protein network | https://string-db.org/network/699218.HMPREF0889_0632 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. |
| EFD94556.1 protein network | https://string-db.org/network/699218.HMPREF0889_0633 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. |
| EFD94557.1 protein network | https://string-db.org/network/699218.HMPREF0889_0634 | Putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Identified by match to protein family HMM PF02277. |
| EFD94558.1 protein network | https://string-db.org/network/699218.HMPREF0889_0635 | 3-dehydroquinate synthase; Identified by match to protein family HMM PF00465; match to protein family HMM PF01761. |
| cstA protein network | https://string-db.org/network/699218.HMPREF0889_0636 | Carbon starvation protein CstA; Identified by match to protein family HMM PF02554. |
| rpsR protein network | https://string-db.org/network/699218.HMPREF0889_0637 | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal p [...] |
| EFD94561.1 protein network | https://string-db.org/network/699218.HMPREF0889_0638 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. |
| rpsF protein network | https://string-db.org/network/699218.HMPREF0889_0639 | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. |
| EFD94563.1 protein network | https://string-db.org/network/699218.HMPREF0889_0640 | Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857. |
| xpt protein network | https://string-db.org/network/699218.HMPREF0889_0641 | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. |
| EFD94565.1 protein network | https://string-db.org/network/699218.HMPREF0889_0642 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94566.1 protein network | https://string-db.org/network/699218.HMPREF0889_0643 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD94567.1 protein network | https://string-db.org/network/699218.HMPREF0889_0644 | butyryl-CoA:acetate CoA-transferase; Identified by match to protein family HMM PF02550. |
| rpoN protein network | https://string-db.org/network/699218.HMPREF0889_0645 | RNA polymerase sigma-54 factor; Identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395. |
| pdxB protein network | https://string-db.org/network/699218.HMPREF0889_0646 | 4-phosphoerythronate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. |
| EFD94570.1 protein network | https://string-db.org/network/699218.HMPREF0889_0647 | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. |
| EFD94571.1 protein network | https://string-db.org/network/699218.HMPREF0889_0648 | Identified by match to protein family HMM PF01863. |
| EFD94572.1 protein network | https://string-db.org/network/699218.HMPREF0889_0649 | Peptidase, M23 family; Identified by match to protein family HMM PF01551. |
| EFD94573.1 protein network | https://string-db.org/network/699218.HMPREF0889_0650 | Hypothetical protein. |
| EFD94574.1 protein network | https://string-db.org/network/699218.HMPREF0889_0651 | Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. |
| soj protein network | https://string-db.org/network/699218.HMPREF0889_0652 | Sporulation initiation inhibitor protein Soj; Identified by match to protein family HMM PF01656. |
| EFD94576.1 protein network | https://string-db.org/network/699218.HMPREF0889_0653 | Hypothetical protein; Identified by glimmer; putative. |
| purA protein network | https://string-db.org/network/699218.HMPREF0889_0654 | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the [...] |
| EFD94578.1 protein network | https://string-db.org/network/699218.HMPREF0889_0655 | Oxidoreductase, FAD/FMN-binding protein; Identified by match to protein family HMM PF00724. |
| EFD94579.1 protein network | https://string-db.org/network/699218.HMPREF0889_0656 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94580.1 protein network | https://string-db.org/network/699218.HMPREF0889_0657 | Sporulation protein YtfJ; Identified by match to protein family HMM PF09579. |
| EFD94581.1 protein network | https://string-db.org/network/699218.HMPREF0889_0658 | Outer membrane protein; Identified by match to protein family HMM PF03938. |
| csoR protein network | https://string-db.org/network/699218.HMPREF0889_0659 | Copper-sensing transcriptional repressor CsoR; Identified by match to protein family HMM PF02583. |
| EFD94583.1 protein network | https://string-db.org/network/699218.HMPREF0889_0660 | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match [...] |
| EFD94584.1 protein network | https://string-db.org/network/699218.HMPREF0889_0661 | Hemagglutinin; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05662. |
| tonB-5 protein network | https://string-db.org/network/699218.HMPREF0889_0662 | TonB-dependent receptor; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00593. |
| EFD93244.1 protein network | https://string-db.org/network/699218.HMPREF0889_0663 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. |
| EFD93245.1 protein network | https://string-db.org/network/699218.HMPREF0889_0664 | Hypothetical protein. |
| etfB protein network | https://string-db.org/network/699218.HMPREF0889_0665 | Electron transfer flavoprotein domain protein; Identified by match to protein family HMM PF01012. |
| etfA protein network | https://string-db.org/network/699218.HMPREF0889_0666 | Electron transfer flavoprotein FAD-binding domain protein; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012. |
| EFD93248.1 protein network | https://string-db.org/network/699218.HMPREF0889_0667 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93249.1 protein network | https://string-db.org/network/699218.HMPREF0889_0668 | Hypothetical protein; Identified by glimmer; putative. |
| polA protein network | https://string-db.org/network/699218.HMPREF0889_0669 | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. |
| mutM protein network | https://string-db.org/network/699218.HMPREF0889_0670 | DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a [...] |
| coaE protein network | https://string-db.org/network/699218.HMPREF0889_0671 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. |
| EFD93253.1 protein network | https://string-db.org/network/699218.HMPREF0889_0672 | Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464. |
| EFD93254.1 protein network | https://string-db.org/network/699218.HMPREF0889_0674 | Hypothetical protein; Identified by glimmer; putative. |
| rimP protein network | https://string-db.org/network/699218.HMPREF0889_0675 | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. |
| nusA protein network | https://string-db.org/network/699218.HMPREF0889_0676 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. |
| EFD93257.1 protein network | https://string-db.org/network/699218.HMPREF0889_0677 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD93258.1 protein network | https://string-db.org/network/699218.HMPREF0889_0678 | Ribosomal protein L7Ae; Identified by match to protein family HMM PF01248. |
| infB protein network | https://string-db.org/network/699218.HMPREF0889_0679 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...] |
| rbfA protein network | https://string-db.org/network/699218.HMPREF0889_0680 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...] |
| EFD93261.1 protein network | https://string-db.org/network/699218.HMPREF0889_0681 | DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. |
| truB protein network | https://string-db.org/network/699218.HMPREF0889_0682 | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. |
| ribF protein network | https://string-db.org/network/699218.HMPREF0889_0683 | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family. |
| tonB-6 protein network | https://string-db.org/network/699218.HMPREF0889_0684 | TonB-dependent receptor; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to [...] |
| EFD93265.1 protein network | https://string-db.org/network/699218.HMPREF0889_0685 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93266.1 protein network | https://string-db.org/network/699218.HMPREF0889_0686 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93267.1 protein network | https://string-db.org/network/699218.HMPREF0889_0687 | AICARFT/IMPCHase bienzyme; Identified by match to protein family HMM PF01808. |
| EFD93268.1 protein network | https://string-db.org/network/699218.HMPREF0889_0688 | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. |
| EFD93269.1 protein network | https://string-db.org/network/699218.HMPREF0889_0689 | Hypothetical protein. |
| EFD93270.1 protein network | https://string-db.org/network/699218.HMPREF0889_0690 | 5'-nucleotidase; Identified by match to protein family HMM PF00702. |
| EFD93271.1 protein network | https://string-db.org/network/699218.HMPREF0889_0691 | Peptidase M16 inactive domain protein; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; match to protein family HMM PF08367. |
| EFD93272.1 protein network | https://string-db.org/network/699218.HMPREF0889_0692 | tRNA ligase class I (E and Q), catalytic domain protein; Identified by match to protein family HMM PF00749; Belongs to the class-I aminoacyl-tRNA synthetase family. |
| mraZ protein network | https://string-db.org/network/699218.HMPREF0889_0693 | Protein MraZ; Identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242; Belongs to the MraZ family. |
| mraW protein network | https://string-db.org/network/699218.HMPREF0889_0694 | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. |
| ftsL protein network | https://string-db.org/network/699218.HMPREF0889_0695 | Putative cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. |
| murE protein network | https://string-db.org/network/699218.HMPREF0889_0696 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (U [...] |
| murF protein network | https://string-db.org/network/699218.HMPREF0889_0697 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of mure [...] |
| mraY protein network | https://string-db.org/network/699218.HMPREF0889_0698 | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...] |
| murD protein network | https://string-db.org/network/699218.HMPREF0889_0699 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCD [...] |
| murG protein network | https://string-db.org/network/699218.HMPREF0889_0700 | Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide [...] |
| murC protein network | https://string-db.org/network/699218.HMPREF0889_0701 | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. |
| ddl protein network | https://string-db.org/network/699218.HMPREF0889_0702 | D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. |
| ftsQ protein network | https://string-db.org/network/699218.HMPREF0889_0703 | POTRA domain protein, FtsQ-type; Essential cell division protein. |
| ftsZ protein network | https://string-db.org/network/699218.HMPREF0889_0704 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...] |
| nrdR protein network | https://string-db.org/network/699218.HMPREF0889_0705 | Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. |
| rfaE protein network | https://string-db.org/network/699218.HMPREF0889_0706 | Bifunctional protein RfaE, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; b [...] |
| gmhB protein network | https://string-db.org/network/699218.HMPREF0889_0707 | D,D-heptose 1,7-bisphosphate phosphatase; Identified by match to protein family HMM PF08645; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662. |
| EFD93288.1 protein network | https://string-db.org/network/699218.HMPREF0889_0708 | Putative lipopolysaccharide heptosyltransferase I; Identified by match to protein family HMM PF01075. |
| EFD93289.1 protein network | https://string-db.org/network/699218.HMPREF0889_0709 | Outer membrane insertion C-terminal signal. |
| EFD93290.1 protein network | https://string-db.org/network/699218.HMPREF0889_0710 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. |
| trmU protein network | https://string-db.org/network/699218.HMPREF0889_0711 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. |
| lepA protein network | https://string-db.org/network/699218.HMPREF0889_0712 | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...] |
| EFD93293.1 protein network | https://string-db.org/network/699218.HMPREF0889_0713 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalentl [...] |
| EFD93294.1 protein network | https://string-db.org/network/699218.HMPREF0889_0714 | Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369. |
| EFD93295.1 protein network | https://string-db.org/network/699218.HMPREF0889_0715 | Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369. |
| acdA protein network | https://string-db.org/network/699218.HMPREF0889_0716 | acyl-CoA dehydrogenase, C-terminal domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein fa [...] |
| pheS protein network | https://string-db.org/network/699218.HMPREF0889_0718 | phenylalanine--tRNA ligase, alpha subunit; Identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; Belongs to the class-II a [...] |
| EFD93299.1 protein network | https://string-db.org/network/699218.HMPREF0889_0719 | Hypothetical protein; Identified by glimmer; putative. |
| pheT protein network | https://string-db.org/network/699218.HMPREF0889_0720 | phenylalanine--tRNA ligase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM [...] |
| tig protein network | https://string-db.org/network/699218.HMPREF0889_0721 | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...] |
| clpP protein network | https://string-db.org/network/699218.HMPREF0889_0722 | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in [...] |
| clpX protein network | https://string-db.org/network/699218.HMPREF0889_0723 | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in t [...] |
| lon protein network | https://string-db.org/network/699218.HMPREF0889_0724 | Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular [...] |
| ysxC protein network | https://string-db.org/network/699218.HMPREF0889_0725 | Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase sup [...] |
| EFD93305.1 protein network | https://string-db.org/network/699218.HMPREF0889_0726 | Hypothetical protein. |
| EFD93306.1 protein network | https://string-db.org/network/699218.HMPREF0889_0727 | Formate C-acetyltransferase; Identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01774. |
| EFD93307.1 protein network | https://string-db.org/network/699218.HMPREF0889_0728 | Identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494. |
| EFD93308.1 protein network | https://string-db.org/network/699218.HMPREF0889_0729 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93309.1 protein network | https://string-db.org/network/699218.HMPREF0889_0730 | Peptidase C1-like family; Identified by match to protein family HMM PF03051; Belongs to the peptidase C1 family. |
| EFD93310.1 protein network | https://string-db.org/network/699218.HMPREF0889_0731 | Cell shape determining protein, MreB/Mrl family; Identified by match to protein family HMM PF06723. |
| mreC protein network | https://string-db.org/network/699218.HMPREF0889_0732 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. |
| mreD protein network | https://string-db.org/network/699218.HMPREF0889_0733 | Rod shape-determining protein MreD; Identified by match to protein family HMM TIGR03426. |
| mrdA protein network | https://string-db.org/network/699218.HMPREF0889_0734 | Penicillin-binding protein 2; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. |
| EFD93314.1 protein network | https://string-db.org/network/699218.HMPREF0889_0735 | CobQ/CobB/MinD/ParA nucleotide binding domain protein; Identified by match to protein family HMM PF01656. |
| mrdB protein network | https://string-db.org/network/699218.HMPREF0889_0736 | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. |
| EFD93316.1 protein network | https://string-db.org/network/699218.HMPREF0889_0737 | S1 RNA binding domain protein; Identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757. |
| EFD93317.1 protein network | https://string-db.org/network/699218.HMPREF0889_0738 | Lactate/malate dehydrogenase, NAD binding domain protein; Identified by match to protein family HMM PF00056; match to protein family HMM PF02866; Belongs to the LDH/MDH superfamily. |
| EFD93318.1 protein network | https://string-db.org/network/699218.HMPREF0889_0739 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD93319.1 protein network | https://string-db.org/network/699218.HMPREF0889_0740 | Putative exodeoxyribonuclease III; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model ma [...] |
| EFD93320.1 protein network | https://string-db.org/network/699218.HMPREF0889_0741 | ACT domain protein; Identified by match to protein family HMM PF01842; Belongs to the UPF0237 family. |
| EFD93321.1 protein network | https://string-db.org/network/699218.HMPREF0889_0742 | Identified by match to protein family HMM PF05167. |
| EFD93322.1 protein network | https://string-db.org/network/699218.HMPREF0889_0743 | Glycosyltransferase, group 4 family; Identified by match to protein family HMM PF00953. |
| EFD93323.1 protein network | https://string-db.org/network/699218.HMPREF0889_0744 | UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. |
| EFD93324.1 protein network | https://string-db.org/network/699218.HMPREF0889_0745 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93325.1 protein network | https://string-db.org/network/699218.HMPREF0889_0746 | Hypothetical protein; Identified by glimmer; putative. |
| atpB protein network | https://string-db.org/network/699218.HMPREF0889_0747 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. |
| atpE protein network | https://string-db.org/network/699218.HMPREF0889_0748 | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extra [...] |
| atpF protein network | https://string-db.org/network/699218.HMPREF0889_0749 | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. |
| atpH protein network | https://string-db.org/network/699218.HMPREF0889_0750 | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the e [...] |
| atpA protein network | https://string-db.org/network/699218.HMPREF0889_0751 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. |
| atpG protein network | https://string-db.org/network/699218.HMPREF0889_0752 | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the f [...] |
| atpD protein network | https://string-db.org/network/699218.HMPREF0889_0753 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. |
| atpC protein network | https://string-db.org/network/699218.HMPREF0889_0754 | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. |
| EFD93334.1 protein network | https://string-db.org/network/699218.HMPREF0889_0755 | Hypothetical protein; Identified by glimmer; putative. |
| ribB protein network | https://string-db.org/network/699218.HMPREF0889_0756 | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GT [...] |
| EFD93335.1 protein network | https://string-db.org/network/699218.HMPREF0889_0757 | Hypothetical protein; Identified by glimmer; putative. |
| ribB-2 protein network | https://string-db.org/network/699218.HMPREF0889_0759 | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. [...] |
| EFD93339.1 protein network | https://string-db.org/network/699218.HMPREF0889_0762 | Putative glycolate oxidase, subunit GlcD; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913. |
| EFD93340.1 protein network | https://string-db.org/network/699218.HMPREF0889_0763 | Septum formation initiator; Identified by match to protein family HMM PF04977. |
| EFD93341.1 protein network | https://string-db.org/network/699218.HMPREF0889_0764 | S1 RNA binding domain protein; Identified by match to protein family HMM PF00575. |
| EFD93342.1 protein network | https://string-db.org/network/699218.HMPREF0889_0765 | Identified by match to protein family HMM PF02541. |
| tilS protein network | https://string-db.org/network/699218.HMPREF0889_0766 | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is [...] |
| hpt protein network | https://string-db.org/network/699218.HMPREF0889_0767 | Hypoxanthine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; Belongs to the purine/pyrimidine phosphoribosyltransferase family [...] |
| hflB protein network | https://string-db.org/network/699218.HMPREF0889_0768 | ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane [...] |
| birA protein network | https://string-db.org/network/699218.HMPREF0889_0769 | biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. |
| coaX protein network | https://string-db.org/network/699218.HMPREF0889_0770 | Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. |
| EFD93348.1 protein network | https://string-db.org/network/699218.HMPREF0889_0771 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridin [...] |
| greA protein network | https://string-db.org/network/699218.HMPREF0889_0772 | Prokaryotic transcription elongation factor, GreA/GreB domain protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites i [...] |
| lysS protein network | https://string-db.org/network/699218.HMPREF0889_0773 | lysine--tRNA ligase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA syntheta [...] |
| repA protein network | https://string-db.org/network/699218.HMPREF0889_0774 | Identified by match to protein family HMM PF06970. |
| EFD93352.1 protein network | https://string-db.org/network/699218.HMPREF0889_0775 | Hypothetical protein. |
| EFD93353.1 protein network | https://string-db.org/network/699218.HMPREF0889_0776 | Hypothetical protein. |
| EFD93354.1 protein network | https://string-db.org/network/699218.HMPREF0889_0777 | Identified by match to protein family HMM PF02534. |
| EFD93355.1 protein network | https://string-db.org/network/699218.HMPREF0889_0778 | Hypothetical protein. |
| EFD93356.1 protein network | https://string-db.org/network/699218.HMPREF0889_0779 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD93357.1 protein network | https://string-db.org/network/699218.HMPREF0889_0780 | Putative translation elongation factor G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM [...] |
| EFD93358.1 protein network | https://string-db.org/network/699218.HMPREF0889_0781 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. |
| EFD93360.1 protein network | https://string-db.org/network/699218.HMPREF0889_0782 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93359.1 protein network | https://string-db.org/network/699218.HMPREF0889_0783 | Hypothetical protein. |
| EFD93361.1 protein network | https://string-db.org/network/699218.HMPREF0889_0784 | Hypothetical protein; Identified by glimmer; putative. |
| repA-2 protein network | https://string-db.org/network/699218.HMPREF0889_0785 | Identified by match to protein family HMM PF06970. |
| EFD93363.1 protein network | https://string-db.org/network/699218.HMPREF0889_0786 | IstB-like ATP-binding protein; Identified by match to protein family HMM PF01695. |
| EFD93364.1 protein network | https://string-db.org/network/699218.HMPREF0889_0787 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93365.1 protein network | https://string-db.org/network/699218.HMPREF0889_0788 | Hypothetical protein. |
| EFD93366.1 protein network | https://string-db.org/network/699218.HMPREF0889_0789 | Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. |
| EFD93367.1 protein network | https://string-db.org/network/699218.HMPREF0889_0790 | Hypothetical protein. |
| EFD93368.1 protein network | https://string-db.org/network/699218.HMPREF0889_0791 | Hypothetical protein. |
| EFD93369.1 protein network | https://string-db.org/network/699218.HMPREF0889_0792 | Hypothetical protein. |
| EFD93370.1 protein network | https://string-db.org/network/699218.HMPREF0889_0793 | Hypothetical protein. |
| EFD93371.1 protein network | https://string-db.org/network/699218.HMPREF0889_0794 | Hypothetical protein. |
| EFD93372.1 protein network | https://string-db.org/network/699218.HMPREF0889_0795 | Hypothetical protein. |
| EFD93373.1 protein network | https://string-db.org/network/699218.HMPREF0889_0796 | DNA topoisomerase; Identified by match to protein family HMM PF01131; match to protein family HMM PF01751. |
| EFD93374.1 protein network | https://string-db.org/network/699218.HMPREF0889_0797 | Divergent AAA domain protein; Identified by match to protein family HMM PF04326. |
| EFD93375.1 protein network | https://string-db.org/network/699218.HMPREF0889_0798 | Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271. |
| EFD93376.1 protein network | https://string-db.org/network/699218.HMPREF0889_0799 | Single-strand binding family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| EFD93377.1 protein network | https://string-db.org/network/699218.HMPREF0889_0800 | Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432. |
| EFD93378.1 protein network | https://string-db.org/network/699218.HMPREF0889_0801 | Hypothetical protein. |
| EFD93379.1 protein network | https://string-db.org/network/699218.HMPREF0889_0802 | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. |
| EFD93380.1 protein network | https://string-db.org/network/699218.HMPREF0889_0803 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. |
| EFD93381.1 protein network | https://string-db.org/network/699218.HMPREF0889_0804 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD93382.1 protein network | https://string-db.org/network/699218.HMPREF0889_0805 | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. |
| EFD93383.1 protein network | https://string-db.org/network/699218.HMPREF0889_0806 | Cobalt transport protein; Identified by match to protein family HMM PF02361. |
| EFD93384.1 protein network | https://string-db.org/network/699218.HMPREF0889_0807 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02463. |
| EFD93385.1 protein network | https://string-db.org/network/699218.HMPREF0889_0808 | MATE domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be m [...] |
| EFD93386.1 protein network | https://string-db.org/network/699218.HMPREF0889_0809 | MATE domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be m [...] |
| EFD93387.1 protein network | https://string-db.org/network/699218.HMPREF0889_0810 | Hypothetical protein. |
| EFD93388.1 protein network | https://string-db.org/network/699218.HMPREF0889_0811 | Hypothetical protein. |
| EFD93389.1 protein network | https://string-db.org/network/699218.HMPREF0889_0812 | Hypothetical protein. |
| EFD93390.1 protein network | https://string-db.org/network/699218.HMPREF0889_0813 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. |
| EFD93391.1 protein network | https://string-db.org/network/699218.HMPREF0889_0814 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93392.1 protein network | https://string-db.org/network/699218.HMPREF0889_0815 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93393.1 protein network | https://string-db.org/network/699218.HMPREF0889_0816 | Hep/Hag repeat protein; Identified by match to protein family HMM PF01391; match to protein family HMM PF05658. |
| EFD93394.1 protein network | https://string-db.org/network/699218.HMPREF0889_0817 | Outer membrane autotransporter barrel domain protein. |
| EFD93395.1 protein network | https://string-db.org/network/699218.HMPREF0889_0818 | Outer membrane autotransporter barrel domain protein. |
| EFD93396.1 protein network | https://string-db.org/network/699218.HMPREF0889_0819 | Hemerythrin HHE cation binding domain protein; Identified by match to protein family HMM PF01814; match to protein family HMM PF04282; match to protein family HMM PF08984. |
| thiL protein network | https://string-db.org/network/699218.HMPREF0889_0820 | Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamin [...] |
| EFD93398.1 protein network | https://string-db.org/network/699218.HMPREF0889_0821 | Hydrolase, P-loop family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. |
| yeaZ protein network | https://string-db.org/network/699218.HMPREF0889_0822 | Universal bacterial protein YeaZ; Identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725. |
| rimI protein network | https://string-db.org/network/699218.HMPREF0889_0823 | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. |
| tsaD protein network | https://string-db.org/network/699218.HMPREF0889_0824 | Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the tran [...] |
| EFD93402.1 protein network | https://string-db.org/network/699218.HMPREF0889_0825 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07568. |
| EFD93403.1 protein network | https://string-db.org/network/699218.HMPREF0889_0826 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF03861. |
| groS protein network | https://string-db.org/network/699218.HMPREF0889_0827 | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. |
| groL protein network | https://string-db.org/network/699218.HMPREF0889_0828 | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. |
| rpmE protein network | https://string-db.org/network/699218.HMPREF0889_0829 | Ribosomal protein L31; Binds the 23S rRNA. |
| EFD93407.1 protein network | https://string-db.org/network/699218.HMPREF0889_0830 | Hypothetical protein; Identified by glimmer; putative. |
| prfA protein network | https://string-db.org/network/699218.HMPREF0889_0831 | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. |
| prmC protein network | https://string-db.org/network/699218.HMPREF0889_0832 | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally [...] |
| EFD93410.1 protein network | https://string-db.org/network/699218.HMPREF0889_0833 | Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. |
| rpiB protein network | https://string-db.org/network/699218.HMPREF0889_0834 | Ribose-5-phosphate isomerase B; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120. |
| upp protein network | https://string-db.org/network/699218.HMPREF0889_0835 | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. |
| EFD93413.1 protein network | https://string-db.org/network/699218.HMPREF0889_0836 | Identified by match to protein family HMM PF00485. |
| ilvA protein network | https://string-db.org/network/699218.HMPREF0889_0837 | Threonine ammonia-lyase; Identified by match to protein family HMM PF00291; match to protein family HMM PF01842; match to protein family HMM TIGR01127. |
| EFD93415.1 protein network | https://string-db.org/network/699218.HMPREF0889_0838 | Amino acid permease; Identified by match to protein family HMM PF00324. |
| EFD93416.1 protein network | https://string-db.org/network/699218.HMPREF0889_0839 | Putative stage V sporulation protein B; Identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023. |
| EFD93417.1 protein network | https://string-db.org/network/699218.HMPREF0889_0840 | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. |
| EFD93418.1 protein network | https://string-db.org/network/699218.HMPREF0889_0841 | Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) fami [...] |
| EFD93419.1 protein network | https://string-db.org/network/699218.HMPREF0889_0842 | RND transporter, HAE1/HME family, permease protein; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. |
| EFD93420.1 protein network | https://string-db.org/network/699218.HMPREF0889_0843 | Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. |
| EFD93421.1 protein network | https://string-db.org/network/699218.HMPREF0889_0844 | Hypothetical protein; Identified by glimmer; putative. |
| hbd protein network | https://string-db.org/network/699218.HMPREF0889_0845 | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737. |
| crt protein network | https://string-db.org/network/699218.HMPREF0889_0846 | 3-hydroxybutyryl-CoA dehydratase; Identified by match to protein family HMM PF00378. |
| EFD93424.1 protein network | https://string-db.org/network/699218.HMPREF0889_0847 | Acyltransferase; Identified by match to protein family HMM PF01757. |
| EFD93425.1 protein network | https://string-db.org/network/699218.HMPREF0889_0848 | Hypothetical protein. |
| EFD93426.1 protein network | https://string-db.org/network/699218.HMPREF0889_0849 | Hypothetical protein; Identified by glimmer; putative. |
| folE protein network | https://string-db.org/network/699218.HMPREF0889_0850 | Putative GTP cyclohydrolase I; Identified by match to protein family HMM PF01227. |
| folP protein network | https://string-db.org/network/699218.HMPREF0889_0851 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate [...] |
| folB protein network | https://string-db.org/network/699218.HMPREF0889_0852 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. |
| folK protein network | https://string-db.org/network/699218.HMPREF0889_0853 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498. |
| EFD93431.1 protein network | https://string-db.org/network/699218.HMPREF0889_0854 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. |
| EFD93432.1 protein network | https://string-db.org/network/699218.HMPREF0889_0855 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518. |
| EFD94270.1 protein network | https://string-db.org/network/699218.HMPREF0889_0856 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative. |
| EFD94271.1 protein network | https://string-db.org/network/699218.HMPREF0889_0857 | Hypothetical protein. |
| carB protein network | https://string-db.org/network/699218.HMPREF0889_0858 | Carbamoyl-phosphate synthase, large subunit; Identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02142; match to protein family H [...] |
| carA protein network | https://string-db.org/network/699218.HMPREF0889_0859 | Carbamoyl-phosphate synthase, small subunit; Identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; Belongs to the CarA fam [...] |
| pyrC protein network | https://string-db.org/network/699218.HMPREF0889_0860 | Amidohydrolase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOas [...] |
| pyrB protein network | https://string-db.org/network/699218.HMPREF0889_0861 | Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine c [...] |
| pyrR protein network | https://string-db.org/network/699218.HMPREF0889_0863 | Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyl [...] |
| EFD94277.1 protein network | https://string-db.org/network/699218.HMPREF0889_0864 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. |
| lspA protein network | https://string-db.org/network/699218.HMPREF0889_0865 | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. |
| EFD94279.1 protein network | https://string-db.org/network/699218.HMPREF0889_0866 | Identified by match to protein family HMM PF01910. |
| EFD94280.1 protein network | https://string-db.org/network/699218.HMPREF0889_0867 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. |
| EFD94281.1 protein network | https://string-db.org/network/699218.HMPREF0889_0868 | Hypothetical protein; Identified by glimmer; putative. |
| rplQ protein network | https://string-db.org/network/699218.HMPREF0889_0869 | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. |
| rpoA protein network | https://string-db.org/network/699218.HMPREF0889_0870 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rpsK protein network | https://string-db.org/network/699218.HMPREF0889_0871 | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...] |
| rpsM protein network | https://string-db.org/network/699218.HMPREF0889_0872 | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...] |
| rpmJ protein network | https://string-db.org/network/699218.HMPREF0889_0873 | Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. |
| infA protein network | https://string-db.org/network/699218.HMPREF0889_0874 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...] |
| EFD94288.1 protein network | https://string-db.org/network/699218.HMPREF0889_0875 | Hypothetical protein. |
| map protein network | https://string-db.org/network/699218.HMPREF0889_0876 | Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...] |
| adk protein network | https://string-db.org/network/699218.HMPREF0889_0877 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...] |
| secY protein network | https://string-db.org/network/699218.HMPREF0889_0878 | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at [...] |
| rplO protein network | https://string-db.org/network/699218.HMPREF0889_0879 | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. |
| rpmD protein network | https://string-db.org/network/699218.HMPREF0889_0880 | Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308. |
| rpsE protein network | https://string-db.org/network/699218.HMPREF0889_0881 | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. |
| rplR protein network | https://string-db.org/network/699218.HMPREF0889_0882 | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. |
| rplF protein network | https://string-db.org/network/699218.HMPREF0889_0883 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA [...] |
| rpsH protein network | https://string-db.org/network/699218.HMPREF0889_0884 | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the [...] |
| rpsN protein network | https://string-db.org/network/699218.HMPREF0889_0885 | Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the [...] |
| rplE protein network | https://string-db.org/network/699218.HMPREF0889_0886 | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In [...] |
| rplX protein network | https://string-db.org/network/699218.HMPREF0889_0887 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. |
| rplN protein network | https://string-db.org/network/699218.HMPREF0889_0888 | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. |
| rpsQ protein network | https://string-db.org/network/699218.HMPREF0889_0889 | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. |
| rpmC protein network | https://string-db.org/network/699218.HMPREF0889_0890 | Ribosomal protein L29; Identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family. |
| rplP protein network | https://string-db.org/network/699218.HMPREF0889_0891 | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. |
| rpsC protein network | https://string-db.org/network/699218.HMPREF0889_0892 | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. |
| rplV protein network | https://string-db.org/network/699218.HMPREF0889_0893 | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of [...] |
| rpsS protein network | https://string-db.org/network/699218.HMPREF0889_0894 | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. |
| rplB protein network | https://string-db.org/network/699218.HMPREF0889_0895 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has [...] |
| rplW protein network | https://string-db.org/network/699218.HMPREF0889_0896 | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking [...] |
| rplD protein network | https://string-db.org/network/699218.HMPREF0889_0897 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. |
| rplC protein network | https://string-db.org/network/699218.HMPREF0889_0898 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal rib [...] |
| rpsJ protein network | https://string-db.org/network/699218.HMPREF0889_0899 | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. |
| EFD94313.1 protein network | https://string-db.org/network/699218.HMPREF0889_0900 | Hypothetical protein. |
| tuf-2 protein network | https://string-db.org/network/699218.HMPREF0889_0901 | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. |
| fusA protein network | https://string-db.org/network/699218.HMPREF0889_0902 | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...] |
| rpsG protein network | https://string-db.org/network/699218.HMPREF0889_0903 | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interfac [...] |
| rpsL protein network | https://string-db.org/network/699218.HMPREF0889_0904 | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50 [...] |
| EFD94318.1 protein network | https://string-db.org/network/699218.HMPREF0889_0905 | Ribosomal protein L7ae family protein. |
| rpoC protein network | https://string-db.org/network/699218.HMPREF0889_0906 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rpoB protein network | https://string-db.org/network/699218.HMPREF0889_0907 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| tyrS protein network | https://string-db.org/network/699218.HMPREF0889_0908 | tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tR [...] |
| fbp protein network | https://string-db.org/network/699218.HMPREF0889_0909 | Firmicute fructose-1,6-bisphosphatase; Identified by match to protein family HMM PF06874. |
| EFD94323.1 protein network | https://string-db.org/network/699218.HMPREF0889_0910 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94324.1 protein network | https://string-db.org/network/699218.HMPREF0889_0911 | Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753. |
| EFD94325.1 protein network | https://string-db.org/network/699218.HMPREF0889_0912 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94326.1 protein network | https://string-db.org/network/699218.HMPREF0889_0913 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94327.1 protein network | https://string-db.org/network/699218.HMPREF0889_0914 | Hypothetical protein. |
| EFD94328.1 protein network | https://string-db.org/network/699218.HMPREF0889_0915 | Identified by match to protein family HMM PF00582. |
| EFD94329.1 protein network | https://string-db.org/network/699218.HMPREF0889_0916 | Citrate transporter; Identified by match to protein family HMM PF03600. |
| speE protein network | https://string-db.org/network/699218.HMPREF0889_0921 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermid [...] |
| EFD94331.1 protein network | https://string-db.org/network/699218.HMPREF0889_0922 | Putative CoA-substrate-specific enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241. |
| EFD94332.1 protein network | https://string-db.org/network/699218.HMPREF0889_0923 | Bacterial type II and III secretion system protein; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. |
| EFD94333.1 protein network | https://string-db.org/network/699218.HMPREF0889_0924 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94334.1 protein network | https://string-db.org/network/699218.HMPREF0889_0925 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD94335.1 protein network | https://string-db.org/network/699218.HMPREF0889_0926 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. |
| EFD94336.1 protein network | https://string-db.org/network/699218.HMPREF0889_0927 | ABC transporter, substrate-binding protein, family 3; Identified by match to protein family HMM PF00497. |
| EFD94337.1 protein network | https://string-db.org/network/699218.HMPREF0889_0928 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94338.1 protein network | https://string-db.org/network/699218.HMPREF0889_0929 | Hypothetical protein. |
| EFD94339.1 protein network | https://string-db.org/network/699218.HMPREF0889_0930 | Hypothetical protein. |
| EFD94340.1 protein network | https://string-db.org/network/699218.HMPREF0889_0931 | Hypothetical protein. |
| pdxB-2 protein network | https://string-db.org/network/699218.HMPREF0889_0932 | 4-phosphoerythronate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. |
| eno protein network | https://string-db.org/network/699218.HMPREF0889_0933 | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the [...] |
| EFD94343.1 protein network | https://string-db.org/network/699218.HMPREF0889_0934 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94344.1 protein network | https://string-db.org/network/699218.HMPREF0889_0935 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. |
| EFD94345.1 protein network | https://string-db.org/network/699218.HMPREF0889_0936 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94787.1 protein network | https://string-db.org/network/699218.HMPREF0889_0938 | HD domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01966. |
| EFD94788.1 protein network | https://string-db.org/network/699218.HMPREF0889_0939 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94789.1 protein network | https://string-db.org/network/699218.HMPREF0889_0940 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94790.1 protein network | https://string-db.org/network/699218.HMPREF0889_0941 | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. |
| EFD94791.1 protein network | https://string-db.org/network/699218.HMPREF0889_0943 | Identified by match to protein family HMM PF00899; match to protein family HMM PF05237. |
| EFD94792.1 protein network | https://string-db.org/network/699218.HMPREF0889_0944 | Hypothetical protein. |
| EFD94793.1 protein network | https://string-db.org/network/699218.HMPREF0889_0945 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. |
| EFD94794.1 protein network | https://string-db.org/network/699218.HMPREF0889_0946 | Iron chelate uptake ABC transporter, FeCT family, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. F [...] |
| EFD94795.1 protein network | https://string-db.org/network/699218.HMPREF0889_0947 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| cobM protein network | https://string-db.org/network/699218.HMPREF0889_0948 | Precorrin-4 C(11)-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465. |
| cbiG protein network | https://string-db.org/network/699218.HMPREF0889_0949 | CbiG; Identified by match to protein family HMM PF01890. |
| cobJ protein network | https://string-db.org/network/699218.HMPREF0889_0950 | precorrin-3B C(17)-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466. |
| cobK protein network | https://string-db.org/network/699218.HMPREF0889_0951 | precorrin-6A reductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to b [...] |
| cbiT protein network | https://string-db.org/network/699218.HMPREF0889_0952 | precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR024 [...] |
| cobB protein network | https://string-db.org/network/699218.HMPREF0889_0953 | Cobyrinic acid a,c-diamide synthase; Identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379. |
| cobH protein network | https://string-db.org/network/699218.HMPREF0889_0954 | precorrin-8X methylmutase; Identified by match to protein family HMM PF02570. |
| EFD94803.1 protein network | https://string-db.org/network/699218.HMPREF0889_0955 | Helix-turn-helix protein, YlxM/p13 family; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a [...] |
| ffh protein network | https://string-db.org/network/699218.HMPREF0889_0956 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...] |
| rpsP protein network | https://string-db.org/network/699218.HMPREF0889_0957 | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. |
| EFD94806.1 protein network | https://string-db.org/network/699218.HMPREF0889_0958 | Hypothetical protein; Belongs to the UPF0109 family. |
| EFD94807.1 protein network | https://string-db.org/network/699218.HMPREF0889_0959 | Hypothetical protein. |
| rimM protein network | https://string-db.org/network/699218.HMPREF0889_0960 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...] |
| trmD protein network | https://string-db.org/network/699218.HMPREF0889_0961 | tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. |
| EFD94810.1 protein network | https://string-db.org/network/699218.HMPREF0889_0962 | Hypothetical protein. |
| EFD94811.1 protein network | https://string-db.org/network/699218.HMPREF0889_0963 | DNA-binding regulatory protein, YebC/PmpR family; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. |
| EFD94812.1 protein network | https://string-db.org/network/699218.HMPREF0889_0964 | Hypothetical protein. |
| EFD94813.1 protein network | https://string-db.org/network/699218.HMPREF0889_0965 | Hypothetical protein. |
| EFD94814.1 protein network | https://string-db.org/network/699218.HMPREF0889_0966 | Putative exopolyphosphatase; Identified by match to protein family HMM PF02541. |
| EFD94815.1 protein network | https://string-db.org/network/699218.HMPREF0889_0967 | Hypothetical protein. |
| EFD94816.1 protein network | https://string-db.org/network/699218.HMPREF0889_0968 | Putative L-ribulose-5-phosphate 4-epimerase; Identified by match to protein family HMM PF00596. |
| speD protein network | https://string-db.org/network/699218.HMPREF0889_0969 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of th [...] |
| rdgB protein network | https://string-db.org/network/699218.HMPREF0889_0970 | Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference fo [...] |
| EFD94819.1 protein network | https://string-db.org/network/699218.HMPREF0889_0971 | Hypothetical protein. |
| EFD94820.1 protein network | https://string-db.org/network/699218.HMPREF0889_0972 | Hypothetical protein; Identified by glimmer; putative. |
| murI protein network | https://string-db.org/network/699218.HMPREF0889_0973 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. |
| EFD94822.1 protein network | https://string-db.org/network/699218.HMPREF0889_0974 | acyl-CoA thioester hydrolase, YbgC/YbaW family; Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051. |
| purC protein network | https://string-db.org/network/699218.HMPREF0889_0975 | Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. |
| EFD94825.1 protein network | https://string-db.org/network/699218.HMPREF0889_0977 | Identified by match to protein family HMM PF01384. |
| EFD94826.1 protein network | https://string-db.org/network/699218.HMPREF0889_0978 | Identified by match to protein family HMM PF01865. |
| purD protein network | https://string-db.org/network/699218.HMPREF0889_0979 | Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF028 [...] |
| EFD94828.1 protein network | https://string-db.org/network/699218.HMPREF0889_0980 | MGS-like domain protein; Identified by match to protein family HMM PF02142. |
| purN protein network | https://string-db.org/network/699218.HMPREF0889_0981 | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...] |
| purM protein network | https://string-db.org/network/699218.HMPREF0889_0982 | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. |
| purF protein network | https://string-db.org/network/699218.HMPREF0889_0983 | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. |
| purE protein network | https://string-db.org/network/699218.HMPREF0889_0984 | Phosphoribosylaminoimidazole carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). |
| pyrD protein network | https://string-db.org/network/699218.HMPREF0889_0985 | Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate. |
| EFD94834.1 protein network | https://string-db.org/network/699218.HMPREF0889_0986 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF00175; match to protein family HMM PF00970. |
| rpoD protein network | https://string-db.org/network/699218.HMPREF0889_0988 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the p [...] |
| dnaG protein network | https://string-db.org/network/699218.HMPREF0889_0989 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. |
| EFD94837.1 protein network | https://string-db.org/network/699218.HMPREF0889_0990 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. |
| fba protein network | https://string-db.org/network/699218.HMPREF0889_0991 | Fructose-1,6-bisphosphate aldolase, class II; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01116; match to [...] |
| EFD93644.1 protein network | https://string-db.org/network/699218.HMPREF0889_0992 | DEAD/DEAH box helicase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00270; match to protein family HMM PF0 [...] |
| tonB-7 protein network | https://string-db.org/network/699218.HMPREF0889_0994 | TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. |
| tonB-8 protein network | https://string-db.org/network/699218.HMPREF0889_0995 | TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. |
| EFD93647.1 protein network | https://string-db.org/network/699218.HMPREF0889_0996 | TonB family domain protein. |
| EFD93648.1 protein network | https://string-db.org/network/699218.HMPREF0889_0997 | Hypothetical protein. |
| EFD93649.1 protein network | https://string-db.org/network/699218.HMPREF0889_0998 | Identified by match to protein family HMM PF00149. |
| EFD93650.1 protein network | https://string-db.org/network/699218.HMPREF0889_0999 | Hypothetical protein. |
| mutY protein network | https://string-db.org/network/699218.HMPREF0889_1000 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. |
| EFD93652.1 protein network | https://string-db.org/network/699218.HMPREF0889_1001 | Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF00149. |
| dprA protein network | https://string-db.org/network/699218.HMPREF0889_1002 | DNA protecting protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732. |
| EFD93654.1 protein network | https://string-db.org/network/699218.HMPREF0889_1003 | Mg chelatase-like protein; Identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368. |
| EFD93655.1 protein network | https://string-db.org/network/699218.HMPREF0889_1004 | Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family. |
| metE protein network | https://string-db.org/network/699218.HMPREF0889_1005 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [...] |
| EFD93657.1 protein network | https://string-db.org/network/699218.HMPREF0889_1006 | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. |
| FbpA protein network | https://string-db.org/network/699218.HMPREF0889_1007 | Identified by match to protein family HMM PF05670; match to protein family HMM PF05833. |
| EFD93659.1 protein network | https://string-db.org/network/699218.HMPREF0889_1009 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...] |
| leuC protein network | https://string-db.org/network/699218.HMPREF0889_1010 | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. |
| leuD protein network | https://string-db.org/network/699218.HMPREF0889_1011 | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Leu [...] |
| leuB protein network | https://string-db.org/network/699218.HMPREF0889_1012 | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...] |
| EFD93663.1 protein network | https://string-db.org/network/699218.HMPREF0889_1013 | Hypothetical protein. |
| EFD93664.1 protein network | https://string-db.org/network/699218.HMPREF0889_1014 | ATPase family associated with various cellular activities (AAA); An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extende [...] |
| EFD93665.1 protein network | https://string-db.org/network/699218.HMPREF0889_1015 | ATPase, AAA family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be me [...] |
| EFD93666.1 protein network | https://string-db.org/network/699218.HMPREF0889_1016 | Sel1 repeat protein; Identified by match to protein family HMM PF08238. |
| EFD93667.1 protein network | https://string-db.org/network/699218.HMPREF0889_1017 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93668.1 protein network | https://string-db.org/network/699218.HMPREF0889_1018 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. |
| EFD93669.1 protein network | https://string-db.org/network/699218.HMPREF0889_1019 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. |
| EFD93670.1 protein network | https://string-db.org/network/699218.HMPREF0889_1020 | ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. |
| EFD93671.1 protein network | https://string-db.org/network/699218.HMPREF0889_1021 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter [...] |
| EFD93672.1 protein network | https://string-db.org/network/699218.HMPREF0889_1022 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. |
| EFD93673.1 protein network | https://string-db.org/network/699218.HMPREF0889_1023 | Heptosyltransferase; Identified by match to protein family HMM PF01075. |
| EFD93674.1 protein network | https://string-db.org/network/699218.HMPREF0889_1024 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. |
| EFD93675.1 protein network | https://string-db.org/network/699218.HMPREF0889_1025 | Hypothetical protein. |
| EFD93676.1 protein network | https://string-db.org/network/699218.HMPREF0889_1026 | Arylsulfatase; Identified by match to protein family HMM PF00884. |
| EFD93677.1 protein network | https://string-db.org/network/699218.HMPREF0889_1027 | 3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501. |
| EFD93678.1 protein network | https://string-db.org/network/699218.HMPREF0889_1031 | Hypothetical protein. |
| EFD93679.1 protein network | https://string-db.org/network/699218.HMPREF0889_1032 | Identified by match to protein family HMM PF00395. |
| EFD93680.1 protein network | https://string-db.org/network/699218.HMPREF0889_1033 | Identified by match to protein family HMM PF00395. |
| EFD93681.1 protein network | https://string-db.org/network/699218.HMPREF0889_1034 | Identified by match to protein family HMM PF00395. |
| EFD93682.1 protein network | https://string-db.org/network/699218.HMPREF0889_1035 | Identified by match to protein family HMM PF00395. |
| EFD93683.1 protein network | https://string-db.org/network/699218.HMPREF0889_1036 | Identified by match to protein family HMM PF02492. |
| EFD93684.1 protein network | https://string-db.org/network/699218.HMPREF0889_1037 | Putative permease; Identified by match to protein family HMM PF03773. |
| EFD93685.1 protein network | https://string-db.org/network/699218.HMPREF0889_1038 | TIGR03943 family protein. |
| tatA-2 protein network | https://string-db.org/network/699218.HMPREF0889_1039 | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine m [...] |
| EFD93687.1 protein network | https://string-db.org/network/699218.HMPREF0889_1040 | 6-O-methylguanine DNA methyltransferase, DNA binding domain protein; Identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589. |
| EFD93688.1 protein network | https://string-db.org/network/699218.HMPREF0889_1041 | Identified by match to protein family HMM PF04402. |
| thiC protein network | https://string-db.org/network/699218.HMPREF0889_1043 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methio [...] |
| EFD93690.1 protein network | https://string-db.org/network/699218.HMPREF0889_1044 | Hep/Hag repeat protein; Identified by match to protein family HMM PF05658; match to protein family HMM PF05662. |
| rplS protein network | https://string-db.org/network/699218.HMPREF0889_1045 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. |
| EFD93692.1 protein network | https://string-db.org/network/699218.HMPREF0889_1046 | Identified by match to protein family HMM PF02694. |
| secA protein network | https://string-db.org/network/699218.HMPREF0889_1047 | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...] |
| prfB protein network | https://string-db.org/network/699218.HMPREF0889_1048 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. |
| EFD93695.1 protein network | https://string-db.org/network/699218.HMPREF0889_1049 | Hypothetical protein. |
| csaB protein network | https://string-db.org/network/699218.HMPREF0889_1050 | Polysaccharide pyruvyl transferase CsaB; Identified by match to protein family HMM PF04230; match to protein family HMM TIGR03609. |
| ftsE protein network | https://string-db.org/network/699218.HMPREF0889_1051 | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. |
| EFD93698.1 protein network | https://string-db.org/network/699218.HMPREF0889_1052 | Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral memb [...] |
| EFD93699.1 protein network | https://string-db.org/network/699218.HMPREF0889_1053 | Peptidase, M23 family; Identified by match to protein family HMM PF01551. |
| EFD93700.1 protein network | https://string-db.org/network/699218.HMPREF0889_1054 | Peptidase, S41 family; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family. |
| EFD93701.1 protein network | https://string-db.org/network/699218.HMPREF0889_1055 | Putative gluconokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family. |
| gnd protein network | https://string-db.org/network/699218.HMPREF0889_1056 | Phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. |
| EFD93703.1 protein network | https://string-db.org/network/699218.HMPREF0889_1057 | Transcriptional regulator, RpiR family; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418. |
| EFD93704.1 protein network | https://string-db.org/network/699218.HMPREF0889_1058 | Peptidase, M50 family; Identified by match to protein family HMM PF02163. |
| EFD93705.1 protein network | https://string-db.org/network/699218.HMPREF0889_1059 | Hypothetical protein; Identified by glimmer; putative. |
| htpX protein network | https://string-db.org/network/699218.HMPREF0889_1060 | Peptidase, M48 family; Identified by match to protein family HMM PF01435; Belongs to the peptidase M48B family. |
| ade protein network | https://string-db.org/network/699218.HMPREF0889_1061 | Adenine deaminase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01178; Belongs to the metallo-dependent hydrolases super [...] |
| EFD93708.1 protein network | https://string-db.org/network/699218.HMPREF0889_1062 | Alcohol dehydrogenase, iron-dependent; Identified by match to protein family HMM PF00465. |
| EFD93709.1 protein network | https://string-db.org/network/699218.HMPREF0889_1063 | Hypothetical protein; Identified by glimmer; putative. |
| recJ protein network | https://string-db.org/network/699218.HMPREF0889_1064 | single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644. |
| relA protein network | https://string-db.org/network/699218.HMPREF0889_1065 | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to c [...] |
| dtd protein network | https://string-db.org/network/699218.HMPREF0889_1066 | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischar [...] |
| EFD93713.1 protein network | https://string-db.org/network/699218.HMPREF0889_1067 | Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753. |
| EFD93714.1 protein network | https://string-db.org/network/699218.HMPREF0889_1068 | Identified by match to protein family HMM PF01594. |
| EFD93715.1 protein network | https://string-db.org/network/699218.HMPREF0889_1069 | Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. |
| hemZ protein network | https://string-db.org/network/699218.HMPREF0889_1070 | Coproporphyrinogen dehydrogenase HemZ; Identified by match to protein family HMM PF04055. |
| hisS protein network | https://string-db.org/network/699218.HMPREF0889_1071 | histidine--tRNA ligase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442. |
| aspS protein network | https://string-db.org/network/699218.HMPREF0889_1072 | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L [...] |
| lepB protein network | https://string-db.org/network/699218.HMPREF0889_1073 | Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family. |
| queF protein network | https://string-db.org/network/699218.HMPREF0889_1074 | preQ(1) synthase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfa [...] |
| EFD93721.1 protein network | https://string-db.org/network/699218.HMPREF0889_1075 | Hypothetical protein; Identified by glimmer; putative. |
| nth protein network | https://string-db.org/network/699218.HMPREF0889_1076 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- [...] |
| EFD93723.1 protein network | https://string-db.org/network/699218.HMPREF0889_1077 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93724.1 protein network | https://string-db.org/network/699218.HMPREF0889_1078 | Putative endoribonuclease L-PSP; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004. |
| prfC protein network | https://string-db.org/network/699218.HMPREF0889_1079 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for U [...] |
| EFD93726.1 protein network | https://string-db.org/network/699218.HMPREF0889_1080 | Putative iron-responsive transcriptional regulator; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. |
| EFD93727.1 protein network | https://string-db.org/network/699218.HMPREF0889_1081 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93728.1 protein network | https://string-db.org/network/699218.HMPREF0889_1082 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. |
| recQ protein network | https://string-db.org/network/699218.HMPREF0889_1083 | ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; [...] |
| thyA protein network | https://string-db.org/network/699218.HMPREF0889_1084 | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate ( [...] |
| folA protein network | https://string-db.org/network/699218.HMPREF0889_1085 | Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. |
| EFD93732.1 protein network | https://string-db.org/network/699218.HMPREF0889_1086 | Cold-shock DNA-binding domain protein; Identified by match to protein family HMM PF00313. |
| EFD93733.1 protein network | https://string-db.org/network/699218.HMPREF0889_1087 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| cadA protein network | https://string-db.org/network/699218.HMPREF0889_1088 | Cadmium-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to [...] |
| trkA protein network | https://string-db.org/network/699218.HMPREF0889_1089 | Potassium transporter peripheral membrane component; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254. |
| EFD93736.1 protein network | https://string-db.org/network/699218.HMPREF0889_1090 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD93737.1 protein network | https://string-db.org/network/699218.HMPREF0889_1091 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD93738.1 protein network | https://string-db.org/network/699218.HMPREF0889_1092 | Cation transport protein; Identified by match to protein family HMM PF02386. |
| EFD93739.1 protein network | https://string-db.org/network/699218.HMPREF0889_1093 | comEA protein; Identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426. |
| EFD93740.1 protein network | https://string-db.org/network/699218.HMPREF0889_1094 | Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360. |
| EFD93741.1 protein network | https://string-db.org/network/699218.HMPREF0889_1095 | DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144. |
| polC protein network | https://string-db.org/network/699218.HMPREF0889_1096 | DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. |
| EFD93743.1 protein network | https://string-db.org/network/699218.HMPREF0889_1097 | Identified by match to protein family HMM PF01371; match to protein family HMM TIGR02531. |
| EFD93744.1 protein network | https://string-db.org/network/699218.HMPREF0889_1098 | Hypothetical protein; Identified by glimmer; putative. |
| dacA protein network | https://string-db.org/network/699218.HMPREF0889_1099 | TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. |
| EFD93746.1 protein network | https://string-db.org/network/699218.HMPREF0889_1100 | Identified by match to protein family HMM PF07949. |
| EFD93747.1 protein network | https://string-db.org/network/699218.HMPREF0889_1101 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. |
| glmM protein network | https://string-db.org/network/699218.HMPREF0889_1102 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. |
| EFD93749.1 protein network | https://string-db.org/network/699218.HMPREF0889_1103 | Hypothetical protein; Identified by glimmer; putative. |
| glmS protein network | https://string-db.org/network/699218.HMPREF0889_1104 | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. |
| rpsB protein network | https://string-db.org/network/699218.HMPREF0889_1105 | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. |
| tsf protein network | https://string-db.org/network/699218.HMPREF0889_1106 | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...] |
| pyrH protein network | https://string-db.org/network/699218.HMPREF0889_1107 | UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP. |
| frr protein network | https://string-db.org/network/699218.HMPREF0889_1108 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...] |
| EFD93755.1 protein network | https://string-db.org/network/699218.HMPREF0889_1109 | Hypothetical protein. |
| uppS protein network | https://string-db.org/network/699218.HMPREF0889_1110 | Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. |
| cdsA protein network | https://string-db.org/network/699218.HMPREF0889_1111 | Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family. |
| dxr protein network | https://string-db.org/network/699218.HMPREF0889_1112 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...] |
| rseP protein network | https://string-db.org/network/699218.HMPREF0889_1113 | RIP metalloprotease RseP; Identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054. |
| ispG protein network | https://string-db.org/network/699218.HMPREF0889_1114 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG fa [...] |
| mfd protein network | https://string-db.org/network/699218.HMPREF0889_1115 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...] |
| EFD93762.1 protein network | https://string-db.org/network/699218.HMPREF0889_1116 | Putative stage V sporulation protein B; Identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023. |
| EFD93763.1 protein network | https://string-db.org/network/699218.HMPREF0889_1117 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. |
| EFD93764.1 protein network | https://string-db.org/network/699218.HMPREF0889_1118 | Putative integration host factor, beta subunit; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental [...] |
| EFD93765.1 protein network | https://string-db.org/network/699218.HMPREF0889_1119 | Monogalactosyldiacylglycerol synthase, C-terminal domain protein; Identified by match to protein family HMM PF04101; match to protein family HMM PF06925. |
| EFD93766.1 protein network | https://string-db.org/network/699218.HMPREF0889_1120 | Identified by match to protein family HMM PF01925. |
| EFD93767.1 protein network | https://string-db.org/network/699218.HMPREF0889_1121 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. |
| EFD93768.1 protein network | https://string-db.org/network/699218.HMPREF0889_1122 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93769.1 protein network | https://string-db.org/network/699218.HMPREF0889_1123 | Identified by match to protein family HMM PF06803. |
| EFD93770.1 protein network | https://string-db.org/network/699218.HMPREF0889_1124 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. |
| lgt protein network | https://string-db.org/network/699218.HMPREF0889_1125 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...] |
| leuS protein network | https://string-db.org/network/699218.HMPREF0889_1126 | leucine--tRNA ligase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs t [...] |
| EFD93773.1 protein network | https://string-db.org/network/699218.HMPREF0889_1127 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. |
| EFD93774.1 protein network | https://string-db.org/network/699218.HMPREF0889_1128 | butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. |
| etfB-2 protein network | https://string-db.org/network/699218.HMPREF0889_1129 | Electron transfer flavoprotein subunit beta; Identified by match to protein family HMM PF01012. |
| etfA-2 protein network | https://string-db.org/network/699218.HMPREF0889_1130 | Electron transfer flavoprotein subunit alpha; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012. |
| EFD93777.1 protein network | https://string-db.org/network/699218.HMPREF0889_1131 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. |
| topA protein network | https://string-db.org/network/699218.HMPREF0889_1132 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...] |
| trmFO protein network | https://string-db.org/network/699218.HMPREF0889_1133 | tRNA:m(5)U-54 methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. |
| hslV protein network | https://string-db.org/network/699218.HMPREF0889_1134 | ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. |
| hslU protein network | https://string-db.org/network/699218.HMPREF0889_1135 | ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by Hsl [...] |
| EFD93782.1 protein network | https://string-db.org/network/699218.HMPREF0889_1136 | Hypothetical protein. |
| thrC protein network | https://string-db.org/network/699218.HMPREF0889_1137 | Threonine synthase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260. |
| EFD93784.1 protein network | https://string-db.org/network/699218.HMPREF0889_1138 | Putative membrane protein; Identified by match to protein family HMM PF00892. |
| EFD93785.1 protein network | https://string-db.org/network/699218.HMPREF0889_1139 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. |
| EFD93786.1 protein network | https://string-db.org/network/699218.HMPREF0889_1140 | Oxidoreductase; Identified by match to protein family HMM PF09719; match to protein family HMM TIGR01909. |
| EFD93787.1 protein network | https://string-db.org/network/699218.HMPREF0889_1141 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93788.1 protein network | https://string-db.org/network/699218.HMPREF0889_1142 | Thermophilic metalloprotease (M29); Identified by match to protein family HMM PF02073. |
| EFD93789.1 protein network | https://string-db.org/network/699218.HMPREF0889_1143 | Putative multidrug efflux protein; Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797. |
| rpsT protein network | https://string-db.org/network/699218.HMPREF0889_1144 | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. |
| EFD93791.1 protein network | https://string-db.org/network/699218.HMPREF0889_1145 | Chromate transport protein; Identified by match to protein family HMM PF02417. |
| EFD93792.1 protein network | https://string-db.org/network/699218.HMPREF0889_1146 | Chromate transport protein; Identified by match to protein family HMM PF02417. |
| EFD93793.1 protein network | https://string-db.org/network/699218.HMPREF0889_1147 | Hypothetical protein. |
| aroK-2 protein network | https://string-db.org/network/699218.HMPREF0889_1148 | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. |
| pfkA protein network | https://string-db.org/network/699218.HMPREF0889_1149 | Putative 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. |
| EFD93796.1 protein network | https://string-db.org/network/699218.HMPREF0889_1150 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. |
| EFD93797.1 protein network | https://string-db.org/network/699218.HMPREF0889_1151 | ABC transporter, ATP-binding protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00005. |
| EFD93479.1 protein network | https://string-db.org/network/699218.HMPREF0889_1153 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93480.1 protein network | https://string-db.org/network/699218.HMPREF0889_1154 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93481.1 protein network | https://string-db.org/network/699218.HMPREF0889_1155 | Hypothetical protein. |
| EFD93482.1 protein network | https://string-db.org/network/699218.HMPREF0889_1156 | Hypothetical protein; Identified by glimmer; putative. |
| dnaE protein network | https://string-db.org/network/699218.HMPREF0889_1157 | DNA polymerase III, alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR005 [...] |
| EFD93484.1 protein network | https://string-db.org/network/699218.HMPREF0889_1158 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93485.1 protein network | https://string-db.org/network/699218.HMPREF0889_1159 | Transporter, lactate permease (LctP) family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. |
| EFD93486.1 protein network | https://string-db.org/network/699218.HMPREF0889_1160 | Identified by match to protein family HMM PF06555. |
| EFD93487.1 protein network | https://string-db.org/network/699218.HMPREF0889_1161 | Transglycosylase; Identified by match to protein family HMM PF00912. |
| argG protein network | https://string-db.org/network/699218.HMPREF0889_1162 | Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily. |
| argH protein network | https://string-db.org/network/699218.HMPREF0889_1163 | Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838. |
| lpxC protein network | https://string-db.org/network/699218.HMPREF0889_1164 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed st [...] |
| fabZ protein network | https://string-db.org/network/699218.HMPREF0889_1165 | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated [...] |
| lpxA protein network | https://string-db.org/network/699218.HMPREF0889_1166 | acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membr [...] |
| EFD93493.1 protein network | https://string-db.org/network/699218.HMPREF0889_1167 | Identified by match to protein family HMM PF06230. |
| lpxB protein network | https://string-db.org/network/699218.HMPREF0889_1168 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...] |
| EFD93495.1 protein network | https://string-db.org/network/699218.HMPREF0889_1169 | Putative lipid A export permease/ATP-binding protein MsbA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. |
| waaA protein network | https://string-db.org/network/699218.HMPREF0889_1170 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV( [...] |
| lpxK protein network | https://string-db.org/network/699218.HMPREF0889_1171 | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis [...] |
| kdsB protein network | https://string-db.org/network/699218.HMPREF0889_1172 | 3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. |
| kdsA protein network | https://string-db.org/network/699218.HMPREF0889_1173 | 3-deoxy-8-phosphooctulonate synthase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01362; Belongs to the KdsA family. |
| EFD93500.1 protein network | https://string-db.org/network/699218.HMPREF0889_1174 | Sugar isomerase, KpsF/GutQ family; Identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; Belongs to the SIS family. GutQ/K [...] |
| EFD93501.1 protein network | https://string-db.org/network/699218.HMPREF0889_1175 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; Identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670. |
| EFD93502.1 protein network | https://string-db.org/network/699218.HMPREF0889_1176 | Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Identified by match to protein family HMM PF03279. |
| EFD93503.1 protein network | https://string-db.org/network/699218.HMPREF0889_1177 | Identified by match to protein family HMM PF06835. |
| EFD93504.1 protein network | https://string-db.org/network/699218.HMPREF0889_1178 | Identified by match to protein family HMM PF03968. |
| EFD93505.1 protein network | https://string-db.org/network/699218.HMPREF0889_1179 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD93506.1 protein network | https://string-db.org/network/699218.HMPREF0889_1180 | Permease, YjgP/YjgQ family; Identified by match to protein family HMM PF03739. |
| EFD93507.1 protein network | https://string-db.org/network/699218.HMPREF0889_1181 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93508.1 protein network | https://string-db.org/network/699218.HMPREF0889_1182 | Hypothetical protein. |
| EFD93509.1 protein network | https://string-db.org/network/699218.HMPREF0889_1183 | Identified by match to protein family HMM PF02588. |
| EFD93510.1 protein network | https://string-db.org/network/699218.HMPREF0889_1184 | Hypothetical protein. |
| EFD93511.1 protein network | https://string-db.org/network/699218.HMPREF0889_1185 | Transcriptional regulator, DeoR family; Identified by match to protein family HMM PF08220. |
| plsX protein network | https://string-db.org/network/699218.HMPREF0889_1186 | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fa [...] |
| fabH protein network | https://string-db.org/network/699218.HMPREF0889_1187 | 3-oxoacyl-(acyl carrier protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...] |
| fabD protein network | https://string-db.org/network/699218.HMPREF0889_1188 | [acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. |
| fabG protein network | https://string-db.org/network/699218.HMPREF0889_1189 | 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...] |
| acpP protein network | https://string-db.org/network/699218.HMPREF0889_1190 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. |
| EFD93517.1 protein network | https://string-db.org/network/699218.HMPREF0889_1191 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by match to protein family HMM PF03060. |
| fabF protein network | https://string-db.org/network/699218.HMPREF0889_1192 | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. |
| rnc protein network | https://string-db.org/network/699218.HMPREF0889_1193 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...] |
| EFD93520.1 protein network | https://string-db.org/network/699218.HMPREF0889_1194 | Putative radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055. |
| EFD93521.1 protein network | https://string-db.org/network/699218.HMPREF0889_1195 | LytTr DNA-binding domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF04397. |
| EFD93522.1 protein network | https://string-db.org/network/699218.HMPREF0889_1196 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. |
| EFD93523.1 protein network | https://string-db.org/network/699218.HMPREF0889_1197 | Hypothetical protein; Identified by glimmer; putative. |
| pycB protein network | https://string-db.org/network/699218.HMPREF0889_1198 | Pyruvate carboxylase subunit B; Identified by match to protein family HMM PF00682; match to protein family HMM PF02436. |
| EFD93525.1 protein network | https://string-db.org/network/699218.HMPREF0889_1199 | RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; Belongs to the class IV-like SAM-binding methyltransferase superfamily. [...] |
| rnhB protein network | https://string-db.org/network/699218.HMPREF0889_1200 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. |
| EFD93527.1 protein network | https://string-db.org/network/699218.HMPREF0889_1201 | Putative hopanoid biosynthesis associated protein HpnK; Identified by match to protein family HMM PF04794. |
| EFD93528.1 protein network | https://string-db.org/network/699218.HMPREF0889_1202 | NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein f [...] |
| EFD93529.1 protein network | https://string-db.org/network/699218.HMPREF0889_1203 | ACT domain protein; Identified by match to protein family HMM PF01842; Belongs to the UPF0735 family. |
| EFD93530.1 protein network | https://string-db.org/network/699218.HMPREF0889_1204 | Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447. |
| thrB protein network | https://string-db.org/network/699218.HMPREF0889_1205 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. |
| deoC protein network | https://string-db.org/network/699218.HMPREF0889_1206 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB ald [...] |
| deoC-2 protein network | https://string-db.org/network/699218.HMPREF0889_1207 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB ald [...] |
| EFD93534.1 protein network | https://string-db.org/network/699218.HMPREF0889_1208 | Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753. |
| EFD93535.1 protein network | https://string-db.org/network/699218.HMPREF0889_1209 | Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595. |
| rlmH protein network | https://string-db.org/network/699218.HMPREF0889_1210 | Putative rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. |
| EFD93537.1 protein network | https://string-db.org/network/699218.HMPREF0889_1211 | CBS domain protein; Identified by match to protein family HMM PF00571. |
| ahpC protein network | https://string-db.org/network/699218.HMPREF0889_1212 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against [...] |
| EFD93539.1 protein network | https://string-db.org/network/699218.HMPREF0889_1213 | Putative thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. |
| EFD93540.1 protein network | https://string-db.org/network/699218.HMPREF0889_1214 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. |
| EFD93541.1 protein network | https://string-db.org/network/699218.HMPREF0889_1215 | Formate C-acetyltransferase; Identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01774. |
| EFD93542.1 protein network | https://string-db.org/network/699218.HMPREF0889_1216 | Identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494. |
| EFD93543.1 protein network | https://string-db.org/network/699218.HMPREF0889_1217 | BMC domain protein; Identified by match to protein family HMM PF00936. |
| EFD93544.1 protein network | https://string-db.org/network/699218.HMPREF0889_1218 | BMC domain protein; Identified by match to protein family HMM PF00936. |
| EFD93545.1 protein network | https://string-db.org/network/699218.HMPREF0889_1219 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93546.1 protein network | https://string-db.org/network/699218.HMPREF0889_1220 | BMC domain protein; Identified by match to protein family HMM PF00936. |
| EFD93547.1 protein network | https://string-db.org/network/699218.HMPREF0889_1221 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93548.1 protein network | https://string-db.org/network/699218.HMPREF0889_1222 | Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; Identified by match to protein family HMM PF03319. |
| EFD93549.1 protein network | https://string-db.org/network/699218.HMPREF0889_1223 | Identified by match to protein family HMM TIGR02529. |
| EFD93550.1 protein network | https://string-db.org/network/699218.HMPREF0889_1224 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171. |
| EFD93551.1 protein network | https://string-db.org/network/699218.HMPREF0889_1225 | Alcohol dehydrogenase, iron-dependent; Identified by match to protein family HMM PF00465. |
| EFD93552.1 protein network | https://string-db.org/network/699218.HMPREF0889_1227 | Exonuclease, DNA polymerase III, epsilon subunit family; Identified by match to protein family HMM PF00580; match to protein family HMM PF00929; match to protein family HMM TIGR00573. |
| EFD93553.1 protein network | https://string-db.org/network/699218.HMPREF0889_1228 | Type II/IV secretion system protein; Identified by match to protein family HMM PF00437. |
| EFD93554.1 protein network | https://string-db.org/network/699218.HMPREF0889_1229 | Twitching motility protein; Identified by match to protein family HMM PF00437. |
| EFD93555.1 protein network | https://string-db.org/network/699218.HMPREF0889_1230 | Bacterial type II secretion system domain protein F; Identified by match to protein family HMM PF00482. |
| EFD93556.1 protein network | https://string-db.org/network/699218.HMPREF0889_1231 | Putative general secretion pathway protein G; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. |
| EFD93557.1 protein network | https://string-db.org/network/699218.HMPREF0889_1232 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93558.1 protein network | https://string-db.org/network/699218.HMPREF0889_1233 | Hypothetical protein. |
| EFD93559.1 protein network | https://string-db.org/network/699218.HMPREF0889_1234 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93560.1 protein network | https://string-db.org/network/699218.HMPREF0889_1235 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93561.1 protein network | https://string-db.org/network/699218.HMPREF0889_1236 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93562.1 protein network | https://string-db.org/network/699218.HMPREF0889_1237 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93563.1 protein network | https://string-db.org/network/699218.HMPREF0889_1238 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93564.1 protein network | https://string-db.org/network/699218.HMPREF0889_1239 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93565.1 protein network | https://string-db.org/network/699218.HMPREF0889_1240 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93566.1 protein network | https://string-db.org/network/699218.HMPREF0889_1241 | Transporter, MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. |
| EFD93567.1 protein network | https://string-db.org/network/699218.HMPREF0889_1242 | Transport energizing protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. |
| EFD93568.1 protein network | https://string-db.org/network/699218.HMPREF0889_1243 | Identified by match to protein family HMM TIGR01352. |
| EFD93569.1 protein network | https://string-db.org/network/699218.HMPREF0889_1244 | Flavodoxin family protein. |
| EFD93570.1 protein network | https://string-db.org/network/699218.HMPREF0889_1245 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. |
| EFD93572.1 protein network | https://string-db.org/network/699218.HMPREF0889_1246 | Hypothetical protein. |
| EFD93571.1 protein network | https://string-db.org/network/699218.HMPREF0889_1247 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. |
| EFD93573.1 protein network | https://string-db.org/network/699218.HMPREF0889_1248 | Hypothetical protein; Identified by glimmer; putative. |
| ilvC protein network | https://string-db.org/network/699218.HMPREF0889_1250 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yie [...] |
| ilvB protein network | https://string-db.org/network/699218.HMPREF0889_1251 | Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to prot [...] |
| ilvN protein network | https://string-db.org/network/699218.HMPREF0889_1252 | Acetolactate synthase, small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119. |
| ilvD protein network | https://string-db.org/network/699218.HMPREF0889_1253 | Dihydroxy-acid dehydratase; Identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110; Belongs to the IlvD/Edd family. |
| EFD93578.1 protein network | https://string-db.org/network/699218.HMPREF0889_1254 | Hypothetical protein; Identified by glimmer; putative. |
| valS protein network | https://string-db.org/network/699218.HMPREF0889_1256 | valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, [...] |
| fgs protein network | https://string-db.org/network/699218.HMPREF0889_1257 | Tetrahydrofolate synthase; Identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; Belongs to the folylpolyglutamate synthas [...] |
| EFD93581.1 protein network | https://string-db.org/network/699218.HMPREF0889_1259 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93583.1 protein network | https://string-db.org/network/699218.HMPREF0889_1260 | O-antigen polymerase; Identified by match to protein family HMM PF04932. |
| rex protein network | https://string-db.org/network/699218.HMPREF0889_1261 | CoA binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. |
| rplM protein network | https://string-db.org/network/699218.HMPREF0889_1262 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of [...] |
| rpsI protein network | https://string-db.org/network/699218.HMPREF0889_1263 | Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. |
| guaA protein network | https://string-db.org/network/699218.HMPREF0889_1264 | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. |
| dam-2 protein network | https://string-db.org/network/699218.HMPREF0889_1265 | DNA adenine methylase; Identified by match to protein family HMM PF02086; match to protein family HMM TIGR00571. |
| alwI protein network | https://string-db.org/network/699218.HMPREF0889_1266 | AlwI restriction endonuclease; Identified by match to protein family HMM PF09491. |
| EFD93590.1 protein network | https://string-db.org/network/699218.HMPREF0889_1267 | Hypothetical protein. |
| EFD93591.1 protein network | https://string-db.org/network/699218.HMPREF0889_1268 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. |
| EFD93592.1 protein network | https://string-db.org/network/699218.HMPREF0889_1269 | Hypothetical protein. |
| EFD93593.1 protein network | https://string-db.org/network/699218.HMPREF0889_1270 | Integrase core domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may ne [...] |
| EFD93594.1 protein network | https://string-db.org/network/699218.HMPREF0889_1271 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93595.1 protein network | https://string-db.org/network/699218.HMPREF0889_1272 | Conserved hypothetical protein TIGR03982; Identified by match to protein family HMM PF00004. |
| EFD93596.1 protein network | https://string-db.org/network/699218.HMPREF0889_1273 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93597.1 protein network | https://string-db.org/network/699218.HMPREF0889_1274 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93598.1 protein network | https://string-db.org/network/699218.HMPREF0889_1275 | Hypothetical protein; Identified by glimmer; putative. |
| hpaIIM protein network | https://string-db.org/network/699218.HMPREF0889_1276 | Modification methylase HpaII; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675. |
| EFD93600.1 protein network | https://string-db.org/network/699218.HMPREF0889_1277 | Identified by match to protein family HMM PF07751. |
| tadA protein network | https://string-db.org/network/699218.HMPREF0889_1279 | Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate [...] |
| EFD93602.1 protein network | https://string-db.org/network/699218.HMPREF0889_1280 | Identified by match to protein family HMM PF03458. |
| EFD93603.1 protein network | https://string-db.org/network/699218.HMPREF0889_1281 | Hypothetical protein. |
| EFD93604.1 protein network | https://string-db.org/network/699218.HMPREF0889_1282 | Identified by match to protein family HMM PF09424. |
| glnA protein network | https://string-db.org/network/699218.HMPREF0889_1283 | Glutamate--ammonia ligase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. |
| EFD93606.1 protein network | https://string-db.org/network/699218.HMPREF0889_1284 | Hypothetical protein; Identified by glimmer; putative. |
| fhs protein network | https://string-db.org/network/699218.HMPREF0889_1285 | Formate--tetrahydrofolate ligase; Identified by match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family. |
| EFD93608.1 protein network | https://string-db.org/network/699218.HMPREF0889_1286 | Formiminotransferase-cyclodeaminase; Identified by match to protein family HMM PF04961. |
| EFD93609.1 protein network | https://string-db.org/network/699218.HMPREF0889_1287 | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. |
| hsdM protein network | https://string-db.org/network/699218.HMPREF0889_1288 | Type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497. |
| EFD93611.1 protein network | https://string-db.org/network/699218.HMPREF0889_1289 | Hypothetical protein. |
| EFD93612.1 protein network | https://string-db.org/network/699218.HMPREF0889_1290 | Type I restriction modification DNA specificity domain protein; Identified by match to protein family HMM PF01420. |
| hsdR protein network | https://string-db.org/network/699218.HMPREF0889_1291 | Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. |
| ychF protein network | https://string-db.org/network/699218.HMPREF0889_1292 | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. |
| EFD93615.1 protein network | https://string-db.org/network/699218.HMPREF0889_1293 | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion [...] |
| EFD93616.1 protein network | https://string-db.org/network/699218.HMPREF0889_1294 | Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene m [...] |
| EFD93617.1 protein network | https://string-db.org/network/699218.HMPREF0889_1295 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| EFD93618.1 protein network | https://string-db.org/network/699218.HMPREF0889_1296 | Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) fami [...] |
| cytX protein network | https://string-db.org/network/699218.HMPREF0889_1297 | Putative hydroxymethylpyrimidine transporter CytX; Identified by match to protein family HMM PF02133; match to protein family HMM TIGR02358. |
| EFD93620.1 protein network | https://string-db.org/network/699218.HMPREF0889_1298 | Putative penicillin-binding protein 1B; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. |
| ppsA protein network | https://string-db.org/network/699218.HMPREF0889_1299 | Pyruvate, water dikinase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. |
| EFD93622.1 protein network | https://string-db.org/network/699218.HMPREF0889_1300 | HTH domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF08279. |
| EFD93623.1 protein network | https://string-db.org/network/699218.HMPREF0889_1301 | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylat [...] |
| thrS protein network | https://string-db.org/network/699218.HMPREF0889_1302 | threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end [...] |
| EFD93625.1 protein network | https://string-db.org/network/699218.HMPREF0889_1303 | Hypothetical protein; Identified by glimmer; putative. |
| EFD93626.1 protein network | https://string-db.org/network/699218.HMPREF0889_1304 | Phage replisome organizer N-terminal domain protein; Identified by match to protein family HMM TIGR01714. |
| EFD94188.1 protein network | https://string-db.org/network/699218.HMPREF0889_1308 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. |
| EFD94189.1 protein network | https://string-db.org/network/699218.HMPREF0889_1309 | Identified by match to protein family HMM PF00877; match to protein family HMM PF01471. |
| alaS protein network | https://string-db.org/network/699218.HMPREF0889_1310 | alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA( [...] |
| EFD94191.1 protein network | https://string-db.org/network/699218.HMPREF0889_1311 | Identified by match to protein family HMM PF06135; Belongs to the UPF0297 family. |
| EFD94192.1 protein network | https://string-db.org/network/699218.HMPREF0889_1312 | RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. |
| EFD94193.1 protein network | https://string-db.org/network/699218.HMPREF0889_1313 | Hypothetical protein. |
| EFD94194.1 protein network | https://string-db.org/network/699218.HMPREF0889_1314 | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. |
| EFD94195.1 protein network | https://string-db.org/network/699218.HMPREF0889_1315 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. |
| raiA protein network | https://string-db.org/network/699218.HMPREF0889_1316 | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present d [...] |
| EFD94197.1 protein network | https://string-db.org/network/699218.HMPREF0889_1317 | Identified by match to protein family HMM PF04816. |
| EFD94198.1 protein network | https://string-db.org/network/699218.HMPREF0889_1318 | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. |
| thiE protein network | https://string-db.org/network/699218.HMPREF0889_1319 | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine [...] |
| EFD94200.1 protein network | https://string-db.org/network/699218.HMPREF0889_1321 | Aspartate kinase, monofunctional class; Identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM [...] |
| EFD94201.1 protein network | https://string-db.org/network/699218.HMPREF0889_1322 | Hypothetical protein; Identified by glimmer; putative. |
| acpS protein network | https://string-db.org/network/699218.HMPREF0889_1323 | Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. |
| nnrD protein network | https://string-db.org/network/699218.HMPREF0889_1324 | YjeF domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted [...] |
| EFD94204.1 protein network | https://string-db.org/network/699218.HMPREF0889_1325 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. |
| gap protein network | https://string-db.org/network/699218.HMPREF0889_1327 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the gly [...] |
| gpmI protein network | https://string-db.org/network/699218.HMPREF0889_1328 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. |
| EFD94207.1 protein network | https://string-db.org/network/699218.HMPREF0889_1329 | Transcriptional regulator, Rrf2 family; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. |
| smc protein network | https://string-db.org/network/699218.HMPREF0889_1330 | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. |
| ftsY protein network | https://string-db.org/network/699218.HMPREF0889_1331 | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...] |
| thiM protein network | https://string-db.org/network/699218.HMPREF0889_1332 | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. |
| EFD94211.1 protein network | https://string-db.org/network/699218.HMPREF0889_1333 | Peptidase, C69 family; Identified by match to protein family HMM PF03577. |
| EFD94212.1 protein network | https://string-db.org/network/699218.HMPREF0889_1334 | Hypothetical protein; Identified by glimmer; putative. |
| pflB-2 protein network | https://string-db.org/network/699218.HMPREF0889_1335 | Formate C-acetyltransferase; Identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255. |
| pflA-2 protein network | https://string-db.org/network/699218.HMPREF0889_1336 | Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavo [...] |
| pflA-3 protein network | https://string-db.org/network/699218.HMPREF0889_1337 | Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavo [...] |
| EFD94216.1 protein network | https://string-db.org/network/699218.HMPREF0889_1338 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94217.1 protein network | https://string-db.org/network/699218.HMPREF0889_1339 | Hemolysin-3; Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. |
| EFD94218.1 protein network | https://string-db.org/network/699218.HMPREF0889_1340 | Hypothetical protein; Identified by glimmer; putative. |
| cobQ protein network | https://string-db.org/network/699218.HMPREF0889_1341 | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed fo [...] |
| cobD protein network | https://string-db.org/network/699218.HMPREF0889_1342 | CobD/CbiB protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. |
| EFD94221.1 protein network | https://string-db.org/network/699218.HMPREF0889_1343 | Putative threonine-phosphate decarboxylase; Identified by match to protein family HMM PF00155. |
| brnQ protein network | https://string-db.org/network/699218.HMPREF0889_1344 | Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids. |
| EFD94223.1 protein network | https://string-db.org/network/699218.HMPREF0889_1345 | Amino acid transporter; Identified by match to protein family HMM PF00324. |
| EFD94364.1 protein network | https://string-db.org/network/699218.HMPREF0889_1346 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF0 [...] |
| EFD94224.1 protein network | https://string-db.org/network/699218.HMPREF0889_1347 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658. |
| EFD94365.1 protein network | https://string-db.org/network/699218.HMPREF0889_1348 | Hypothetical protein; Identified by glimmer; putative. |
| panD protein network | https://string-db.org/network/699218.HMPREF0889_1349 | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. |
| panC protein network | https://string-db.org/network/699218.HMPREF0889_1350 | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase f [...] |
| proS protein network | https://string-db.org/network/699218.HMPREF0889_1351 | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA( [...] |
| cbiK protein network | https://string-db.org/network/699218.HMPREF0889_1352 | Cobalt chelatase (CbiK); Identified by match to protein family HMM PF01903; match to protein family HMM PF06180. |
| hydF protein network | https://string-db.org/network/699218.HMPREF0889_1353 | Hydrogenase maturation GTPase HydF; Identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231. |
| EFD94371.1 protein network | https://string-db.org/network/699218.HMPREF0889_1354 | Oxidoreductase, nitrogenase component 1; Identified by match to protein family HMM PF00148. |
| EFD94372.1 protein network | https://string-db.org/network/699218.HMPREF0889_1355 | Hypothetical protein; Identified by glimmer; putative. |
| nifH protein network | https://string-db.org/network/699218.HMPREF0889_1356 | Putative nitrogenase iron protein; Identified by match to protein family HMM PF00142; Belongs to the NifH/BchL/ChlL family. |
| hypE protein network | https://string-db.org/network/699218.HMPREF0889_1357 | Hydrogenase expression/formation protein HypE; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124. |
| EFD94375.1 protein network | https://string-db.org/network/699218.HMPREF0889_1358 | Hydrogenase formation hypA family; Identified by match to protein family HMM PF01924. |
| hypC protein network | https://string-db.org/network/699218.HMPREF0889_1359 | Hydrogenase assembly chaperone HypC/HupF; Identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074. |
| hypF protein network | https://string-db.org/network/699218.HMPREF0889_1360 | Carbamoyltransferase HypF; Identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143. |
| EFD94378.1 protein network | https://string-db.org/network/699218.HMPREF0889_1361 | Hypothetical protein. |
| EFD94379.1 protein network | https://string-db.org/network/699218.HMPREF0889_1362 | Oxidoreductase, nitrogenase component 1; Identified by match to protein family HMM PF00148. |
| nifH-2 protein network | https://string-db.org/network/699218.HMPREF0889_1363 | Putative nitrogenase iron protein; Identified by match to protein family HMM PF00142; Belongs to the NifH/BchL/ChlL family. |
| EFD94381.1 protein network | https://string-db.org/network/699218.HMPREF0889_1364 | Putative iron-only hydrogenase system regulator. |
| gltT protein network | https://string-db.org/network/699218.HMPREF0889_1365 | Proton/sodium-glutamate symport protein GltT; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. |
| EFD94383.1 protein network | https://string-db.org/network/699218.HMPREF0889_1366 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94384.1 protein network | https://string-db.org/network/699218.HMPREF0889_1367 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94385.1 protein network | https://string-db.org/network/699218.HMPREF0889_1368 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94386.1 protein network | https://string-db.org/network/699218.HMPREF0889_1369 | Hypothetical protein. |
| EFD94387.1 protein network | https://string-db.org/network/699218.HMPREF0889_1370 | 3-methyladenine DNA glycosylase; Identified by match to protein family HMM PF02245; match to protein family HMM TIGR00567; Belongs to the DNA glycosylase MPG family. |
| EFD94388.1 protein network | https://string-db.org/network/699218.HMPREF0889_1371 | IclR helix-turn-helix domain protein; Identified by match to protein family HMM PF01614; match to protein family HMM PF09339. |
| EFD94389.1 protein network | https://string-db.org/network/699218.HMPREF0889_1372 | Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. |
| bofA protein network | https://string-db.org/network/699218.HMPREF0889_1373 | pro-sigmaK processing inhibitor BofA. |
| recR protein network | https://string-db.org/network/699218.HMPREF0889_1374 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. |
| EFD94392.1 protein network | https://string-db.org/network/699218.HMPREF0889_1375 | DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. |
| EFD94393.1 protein network | https://string-db.org/network/699218.HMPREF0889_1376 | Hypothetical protein; Identified by glimmer; putative. |
| dnaX protein network | https://string-db.org/network/699218.HMPREF0889_1377 | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' t [...] |
| stp-2 protein network | https://string-db.org/network/699218.HMPREF0889_1379 | Serine transporter. |
| dapF protein network | https://string-db.org/network/699218.HMPREF0889_1380 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...] |
| EFD94397.1 protein network | https://string-db.org/network/699218.HMPREF0889_1381 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311. |
| EFD94398.1 protein network | https://string-db.org/network/699218.HMPREF0889_1382 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94399.1 protein network | https://string-db.org/network/699218.HMPREF0889_1383 | Aconitase domain protein; Identified by match to protein family HMM PF00330; match to protein family HMM PF00694. |
| EFD94400.1 protein network | https://string-db.org/network/699218.HMPREF0889_1384 | Citrate (Si)-synthase; Identified by match to protein family HMM PF00285; Belongs to the citrate synthase family. |
| EFD94401.1 protein network | https://string-db.org/network/699218.HMPREF0889_1385 | Putative isocitrate dehydrogenase, NAD-dependent; Identified by match to protein family HMM PF00180. |
| EFD94402.1 protein network | https://string-db.org/network/699218.HMPREF0889_1386 | O-methyltransferase domain protein; Identified by match to protein family HMM PF02409. |
| dps1 protein network | https://string-db.org/network/699218.HMPREF0889_1387 | DNA protection during starvation protein 1; Identified by match to protein family HMM PF00210; Belongs to the Dps family. |
| EFD94404.1 protein network | https://string-db.org/network/699218.HMPREF0889_1388 | Transporter associated domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene mode [...] |
| EFD94405.1 protein network | https://string-db.org/network/699218.HMPREF0889_1389 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| gyrB protein network | https://string-db.org/network/699218.HMPREF0889_1390 | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...] |
| EFD94407.1 protein network | https://string-db.org/network/699218.HMPREF0889_1391 | Hypothetical protein. |
| EFD94408.1 protein network | https://string-db.org/network/699218.HMPREF0889_1392 | Hypothetical protein; Identified by glimmer; putative. |
| recF protein network | https://string-db.org/network/699218.HMPREF0889_1393 | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-strand [...] |
| EFD94410.1 protein network | https://string-db.org/network/699218.HMPREF0889_1394 | S4 domain family protein. |
| dnaN protein network | https://string-db.org/network/699218.HMPREF0889_1395 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...] |
| dnaA protein network | https://string-db.org/network/699218.HMPREF0889_1396 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...] |
| rpmH protein network | https://string-db.org/network/699218.HMPREF0889_1397 | Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family. |
| rnpA protein network | https://string-db.org/network/699218.HMPREF0889_1398 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...] |
| EFD94415.1 protein network | https://string-db.org/network/699218.HMPREF0889_1399 | Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. |
| EFD94416.1 protein network | https://string-db.org/network/699218.HMPREF0889_1400 | Membrane protein insertase, YidC/Oxa1 family; Identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592. |
| EFD94417.1 protein network | https://string-db.org/network/699218.HMPREF0889_1401 | R3H domain protein; Identified by match to protein family HMM PF01424. |
| trmE protein network | https://string-db.org/network/699218.HMPREF0889_1402 | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...] |
| gidA protein network | https://string-db.org/network/699218.HMPREF0889_1403 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...] |
| gidB protein network | https://string-db.org/network/699218.HMPREF0889_1404 | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. |
| EFD94421.1 protein network | https://string-db.org/network/699218.HMPREF0889_1405 | Identified by match to protein family HMM PF08348. |
| EFD94422.1 protein network | https://string-db.org/network/699218.HMPREF0889_1406 | Identified by match to protein family HMM PF06354; Belongs to the UPF0597 family. |
| EFD94423.1 protein network | https://string-db.org/network/699218.HMPREF0889_1407 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94424.1 protein network | https://string-db.org/network/699218.HMPREF0889_1408 | Lactate/malate dehydrogenase, NAD binding domain protein; Identified by match to protein family HMM PF00056; match to protein family HMM PF02866; Belongs to the LDH/MDH superfamily. |
| EFD94425.1 protein network | https://string-db.org/network/699218.HMPREF0889_1409 | ErfK/YbiS/YcfS/YnhG; Identified by match to protein family HMM PF03734. |
| EFD94426.1 protein network | https://string-db.org/network/699218.HMPREF0889_1410 | Hypothetical protein. |
| EFD94427.1 protein network | https://string-db.org/network/699218.HMPREF0889_1411 | Dinitrogenase iron-molybdenum cofactor; Identified by match to protein family HMM PF02579. |
| bioA protein network | https://string-db.org/network/699218.HMPREF0889_1412 | Adenosylmethionine-8-amino-7-oxononanoate transaminase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00508; Belongs to the class-III pyridoxal-phosphate-depe [...] |
| EFD94428.1 protein network | https://string-db.org/network/699218.HMPREF0889_1413 | Hypothetical protein. |
| bioD protein network | https://string-db.org/network/699218.HMPREF0889_1414 | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an urei [...] |
| EFD94431.1 protein network | https://string-db.org/network/699218.HMPREF0889_1415 | Identified by match to protein family HMM PF02632. |
| EFD94432.1 protein network | https://string-db.org/network/699218.HMPREF0889_1416 | Hypothetical protein; Identified by glimmer; putative. |
| rpmG protein network | https://string-db.org/network/699218.HMPREF0889_1418 | Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family. |
| secE protein network | https://string-db.org/network/699218.HMPREF0889_1419 | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. |
| nusG protein network | https://string-db.org/network/699218.HMPREF0889_1420 | Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination. |
| rplK protein network | https://string-db.org/network/699218.HMPREF0889_1421 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. |
| rplA protein network | https://string-db.org/network/699218.HMPREF0889_1422 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. |
| rplJ protein network | https://string-db.org/network/699218.HMPREF0889_1423 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein [...] |
| rplL protein network | https://string-db.org/network/699218.HMPREF0889_1424 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacter [...] |
| EFD94440.1 protein network | https://string-db.org/network/699218.HMPREF0889_1425 | Identified by match to protein family HMM PF00881. |
| EFD94687.1 protein network | https://string-db.org/network/699218.HMPREF0889_1426 | GIY-YIG catalytic domain protein; Identified by match to protein family HMM PF01541. |
| EFD94688.1 protein network | https://string-db.org/network/699218.HMPREF0889_1427 | Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belon [...] |
| EFD94689.1 protein network | https://string-db.org/network/699218.HMPREF0889_1428 | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. |
| hcp protein network | https://string-db.org/network/699218.HMPREF0889_1429 | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. |
| EFD94691.1 protein network | https://string-db.org/network/699218.HMPREF0889_1430 | Hep/Hag repeat protein; Identified by match to protein family HMM PF05658. |
| EFD94692.1 protein network | https://string-db.org/network/699218.HMPREF0889_1431 | Hep/Hag repeat protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to b [...] |
| EFD94693.1 protein network | https://string-db.org/network/699218.HMPREF0889_1432 | Identified by match to protein family HMM PF00877; match to protein family HMM PF01471. |
| EFD94694.1 protein network | https://string-db.org/network/699218.HMPREF0889_1433 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94695.1 protein network | https://string-db.org/network/699218.HMPREF0889_1434 | Hypothetical protein. |
| EFD94696.1 protein network | https://string-db.org/network/699218.HMPREF0889_1435 | ATPase family associated with various cellular activities (AAA); Identified by match to protein family HMM PF07728. |
| EFD94697.1 protein network | https://string-db.org/network/699218.HMPREF0889_1436 | Hypothetical protein. |
| EFD94698.1 protein network | https://string-db.org/network/699218.HMPREF0889_1437 | Identified by match to protein family HMM PF03553. |
| EFD94699.1 protein network | https://string-db.org/network/699218.HMPREF0889_1438 | Hydrolase, TatD family; Identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010. |
| metG protein network | https://string-db.org/network/699218.HMPREF0889_1439 | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. |
| yraL protein network | https://string-db.org/network/699218.HMPREF0889_1440 | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. |
| EFD94702.1 protein network | https://string-db.org/network/699218.HMPREF0889_1441 | Methyltransferase small domain protein; Identified by match to protein family HMM PF05175. |
| EFD94703.1 protein network | https://string-db.org/network/699218.HMPREF0889_1442 | PSP1 C-terminal domain protein; Identified by match to protein family HMM PF04468. |
| EFD94704.1 protein network | https://string-db.org/network/699218.HMPREF0889_1443 | Putative DNA polymerase III, delta' subunit. |
| tmk protein network | https://string-db.org/network/699218.HMPREF0889_1444 | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. |
| EFD94706.1 protein network | https://string-db.org/network/699218.HMPREF0889_1445 | Orn/Lys/Arg decarboxylase, major domain protein; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. |
| EFD94707.1 protein network | https://string-db.org/network/699218.HMPREF0889_1446 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94708.1 protein network | https://string-db.org/network/699218.HMPREF0889_1447 | Pyridoxal kinase; Identified by match to protein family HMM PF08543; Belongs to the pyridoxine kinase family. |
| EFD94709.1 protein network | https://string-db.org/network/699218.HMPREF0889_1448 | Identified by match to protein family HMM PF04138. |
| EFD94710.1 protein network | https://string-db.org/network/699218.HMPREF0889_1449 | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047; match to protein family HMM PF01978. |
| sfsA protein network | https://string-db.org/network/699218.HMPREF0889_1450 | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF01986; match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. |
| EFD94712.1 protein network | https://string-db.org/network/699218.HMPREF0889_1451 | Hypothetical protein. |
| EFD94713.1 protein network | https://string-db.org/network/699218.HMPREF0889_1452 | Phage minor structural protein GP20; Identified by match to protein family HMM PF06810. |
| EFD94714.1 protein network | https://string-db.org/network/699218.HMPREF0889_1453 | Hypothetical protein. |
| EFD94715.1 protein network | https://string-db.org/network/699218.HMPREF0889_1454 | Hypothetical protein. |
| EFD94716.1 protein network | https://string-db.org/network/699218.HMPREF0889_1455 | Hypothetical protein. |
| EFD94717.1 protein network | https://string-db.org/network/699218.HMPREF0889_1456 | Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641. |
| EFD94718.1 protein network | https://string-db.org/network/699218.HMPREF0889_1457 | Hypothetical protein. |
| gyrA protein network | https://string-db.org/network/699218.HMPREF0889_1458 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...] |
| EFD94720.1 protein network | https://string-db.org/network/699218.HMPREF0889_1459 | Identified by match to protein family HMM PF03009. |
| agcS-3 protein network | https://string-db.org/network/699218.HMPREF0889_1460 | Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835. |
| EFD94722.1 protein network | https://string-db.org/network/699218.HMPREF0889_1461 | Identified by match to protein family HMM PF04304. |
| pepD protein network | https://string-db.org/network/699218.HMPREF0889_1462 | Xaa-His dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893. |
| EFD94724.1 protein network | https://string-db.org/network/699218.HMPREF0889_1463 | Oligopeptide transporter, OPT family; Identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733. |
| EFD94726.1 protein network | https://string-db.org/network/699218.HMPREF0889_1464 | Identified by match to protein family HMM PF01569. |
| EFD94725.1 protein network | https://string-db.org/network/699218.HMPREF0889_1465 | 4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037. |
| EFD94727.1 protein network | https://string-db.org/network/699218.HMPREF0889_1466 | Putative glutamine ABC transporter periplasmic protein; Identified by match to protein family HMM PF00497. |
| queC protein network | https://string-db.org/network/699218.HMPREF0889_1467 | Protein ExsB; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). |
| pyk protein network | https://string-db.org/network/699218.HMPREF0889_1468 | Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF00391; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the [...] |
| fusA-2 protein network | https://string-db.org/network/699218.HMPREF0889_1469 | Translation elongation factor G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; [...] |
| EFD94731.1 protein network | https://string-db.org/network/699218.HMPREF0889_1470 | Putative type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384. |
| EFD94732.1 protein network | https://string-db.org/network/699218.HMPREF0889_1471 | Hypothetical protein; Identified by glimmer; putative. |
| hsdR-2 protein network | https://string-db.org/network/699218.HMPREF0889_1472 | Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. |
| EFD94735.1 protein network | https://string-db.org/network/699218.HMPREF0889_1473 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94734.1 protein network | https://string-db.org/network/699218.HMPREF0889_1474 | Aminopeptidase I zinc metalloprotease (M18); Identified by match to protein family HMM PF02127. |
| EFD94736.1 protein network | https://string-db.org/network/699218.HMPREF0889_1475 | Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147. |
| gntT protein network | https://string-db.org/network/699218.HMPREF0889_1476 | High-affinity gluconate transporter; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. |
| EFD94738.1 protein network | https://string-db.org/network/699218.HMPREF0889_1477 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94739.1 protein network | https://string-db.org/network/699218.HMPREF0889_1478 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94740.1 protein network | https://string-db.org/network/699218.HMPREF0889_1479 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. |
| EFD94741.1 protein network | https://string-db.org/network/699218.HMPREF0889_1480 | Transporter, auxin efflux carrier (AEC) family protein; Identified by match to protein family HMM PF03547. |
| EFD94742.1 protein network | https://string-db.org/network/699218.HMPREF0889_1481 | Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753. |
| pth protein network | https://string-db.org/network/699218.HMPREF0889_1482 | aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. |
| prs protein network | https://string-db.org/network/699218.HMPREF0889_1483 | Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydr [...] |
| glmU protein network | https://string-db.org/network/699218.HMPREF0889_1484 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (U [...] |
| EFD94746.1 protein network | https://string-db.org/network/699218.HMPREF0889_1485 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94747.1 protein network | https://string-db.org/network/699218.HMPREF0889_1486 | 3D domain protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF06725. |
| EFD94749.1 protein network | https://string-db.org/network/699218.HMPREF0889_1487 | Chloride transporter, ClC family; Identified by match to protein family HMM PF00654; match to protein family HMM PF02080. |
| EFD94748.1 protein network | https://string-db.org/network/699218.HMPREF0889_1488 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94750.1 protein network | https://string-db.org/network/699218.HMPREF0889_1489 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. |
| EFD94751.1 protein network | https://string-db.org/network/699218.HMPREF0889_1490 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD94752.1 protein network | https://string-db.org/network/699218.HMPREF0889_1491 | Identified by match to protein family HMM PF00149. |
| EFD94753.1 protein network | https://string-db.org/network/699218.HMPREF0889_1492 | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. |
| EFD94755.1 protein network | https://string-db.org/network/699218.HMPREF0889_1493 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. |
| bioB protein network | https://string-db.org/network/699218.HMPREF0889_1494 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily [...] |
| thiS protein network | https://string-db.org/network/699218.HMPREF0889_1495 | Thiamine biosynthesis protein ThiS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model m [...] |
| thiG protein network | https://string-db.org/network/699218.HMPREF0889_1496 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxy [...] |
| thiH protein network | https://string-db.org/network/699218.HMPREF0889_1497 | Thiazole biosynthesis protein ThiH; Identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR02351. |
| EFD94759.1 protein network | https://string-db.org/network/699218.HMPREF0889_1498 | Hypothetical protein. |
| EFD94760.1 protein network | https://string-db.org/network/699218.HMPREF0889_1499 | Putative thiamine-phosphate diphosphorylase; Identified by match to protein family HMM PF02581. |
| EFD94761.1 protein network | https://string-db.org/network/699218.HMPREF0889_1500 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94762.1 protein network | https://string-db.org/network/699218.HMPREF0889_1501 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94763.1 protein network | https://string-db.org/network/699218.HMPREF0889_1502 | Hypothetical protein. |
| cat protein network | https://string-db.org/network/699218.HMPREF0889_1503 | 4-hydroxybutyrate coenzyme A transferase; Identified by match to protein family HMM PF02550. |
| EFD94765.1 protein network | https://string-db.org/network/699218.HMPREF0889_1504 | Identified by match to protein family HMM PF03241. |
| EFD94766.1 protein network | https://string-db.org/network/699218.HMPREF0889_1505 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94767.1 protein network | https://string-db.org/network/699218.HMPREF0889_1506 | Identified by match to protein family HMM PF01106. |
| EFD94768.1 protein network | https://string-db.org/network/699218.HMPREF0889_1507 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94769.1 protein network | https://string-db.org/network/699218.HMPREF0889_1508 | Hypothetical protein. |
| EFD94770.1 protein network | https://string-db.org/network/699218.HMPREF0889_1509 | Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753. |
| luxE protein network | https://string-db.org/network/699218.HMPREF0889_1510 | Acyl-protein synthetase, LuxE; Identified by match to protein family HMM PF04443. |
| luxC protein network | https://string-db.org/network/699218.HMPREF0889_1511 | Acyl-CoA reductase (LuxC); Identified by match to protein family HMM PF05893. |
| EFD94773.1 protein network | https://string-db.org/network/699218.HMPREF0889_1512 | AMP-binding enzyme; Identified by match to protein family HMM PF00501. |
| EFD94774.1 protein network | https://string-db.org/network/699218.HMPREF0889_1513 | PAS domain S-box protein; Identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM TIGR00229. |
| EFD94775.1 protein network | https://string-db.org/network/699218.HMPREF0889_1514 | Identified by match to protein family HMM PF02001. |
| EFD94776.1 protein network | https://string-db.org/network/699218.HMPREF0889_1515 | Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. |
| EFD94777.1 protein network | https://string-db.org/network/699218.HMPREF0889_1516 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94778.1 protein network | https://string-db.org/network/699218.HMPREF0889_1517 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94779.1 protein network | https://string-db.org/network/699218.HMPREF0889_1518 | Hypothetical protein; Identified by glimmer; putative. |
| dinB protein network | https://string-db.org/network/699218.HMPREF0889_1519 | Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatche [...] |
| lysR-3 protein network | https://string-db.org/network/699218.HMPREF0889_1520 | LysR substrate binding domain protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. |
| EFD94782.1 protein network | https://string-db.org/network/699218.HMPREF0889_1521 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94783.1 protein network | https://string-db.org/network/699218.HMPREF0889_1522 | Hypothetical protein. |
| EFD94784.1 protein network | https://string-db.org/network/699218.HMPREF0889_1523 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative. |
| EFD94785.1 protein network | https://string-db.org/network/699218.HMPREF0889_1524 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94441.1 protein network | https://string-db.org/network/699218.HMPREF0889_1525 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF0 [...] |
| EFD94346.1 protein network | https://string-db.org/network/699218.HMPREF0889_1526 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. |
| cgtA protein network | https://string-db.org/network/699218.HMPREF0889_1527 | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a ro [...] |
| EFD94348.1 protein network | https://string-db.org/network/699218.HMPREF0889_1528 | Putative RNA-binding protein, YhbY family; Identified by match to protein family HMM PF01985. |
| proB protein network | https://string-db.org/network/699218.HMPREF0889_1529 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. |
| proA protein network | https://string-db.org/network/699218.HMPREF0889_1530 | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cycl [...] |
| nadD protein network | https://string-db.org/network/699218.HMPREF0889_1532 | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). |
| EFD94353.1 protein network | https://string-db.org/network/699218.HMPREF0889_1533 | Hydrolase, HD family; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00488. |
| EFD94354.1 protein network | https://string-db.org/network/699218.HMPREF0889_1534 | Hypothetical protein; Identified by glimmer; putative. |
| rsfS protein network | https://string-db.org/network/699218.HMPREF0889_1535 | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S r [...] |
| EFD94356.1 protein network | https://string-db.org/network/699218.HMPREF0889_1536 | Hypothetical protein; Belongs to the CvfB family. |
| EFD94357.1 protein network | https://string-db.org/network/699218.HMPREF0889_1537 | Hypothetical protein; Identified by glimmer; putative. |
| ppk1 protein network | https://string-db.org/network/699218.HMPREF0889_1538 | Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. |
| gltS protein network | https://string-db.org/network/699218.HMPREF0889_1539 | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. |
| tmcAL protein network | https://string-db.org/network/699218.HMPREF0889_1540 | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to [...] |
| EFD94361.1 protein network | https://string-db.org/network/699218.HMPREF0889_1541 | Hypothetical protein. |
| ackA protein network | https://string-db.org/network/699218.HMPREF0889_1542 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. |
| EFD94363.1 protein network | https://string-db.org/network/699218.HMPREF0889_1543 | Haloacid dehalogenase-like hydrolase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00702. |
| EFD93478.1 protein network | https://string-db.org/network/699218.HMPREF0889_1544 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF0 [...] |
| EFD93999.1 protein network | https://string-db.org/network/699218.HMPREF0889_1546 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative. |
| EFD94000.1 protein network | https://string-db.org/network/699218.HMPREF0889_1547 | Hep/Hag repeat protein; Identified by match to protein family HMM PF05658; match to protein family HMM PF05662. |
| EFD94001.1 protein network | https://string-db.org/network/699218.HMPREF0889_1548 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94002.1 protein network | https://string-db.org/network/699218.HMPREF0889_1549 | Hep/Hag repeat protein; Identified by match to protein family HMM PF05658; match to protein family HMM PF05662. |
| EFD94003.1 protein network | https://string-db.org/network/699218.HMPREF0889_1550 | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. |
| EFD94004.1 protein network | https://string-db.org/network/699218.HMPREF0889_1551 | Identified by match to protein family HMM PF02562. |
| ybeY protein network | https://string-db.org/network/699218.HMPREF0889_1552 | Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. |
| cdd protein network | https://string-db.org/network/699218.HMPREF0889_1553 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. |
| era protein network | https://string-db.org/network/699218.HMPREF0889_1554 | Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possi [...] |
| EFD94008.1 protein network | https://string-db.org/network/699218.HMPREF0889_1555 | Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. |
| EFD94009.1 protein network | https://string-db.org/network/699218.HMPREF0889_1556 | Putative DNA repair protein RecO. |
| rplU protein network | https://string-db.org/network/699218.HMPREF0889_1557 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. |
| EFD94011.1 protein network | https://string-db.org/network/699218.HMPREF0889_1558 | Identified by match to protein family HMM PF04327. |
| rpmA protein network | https://string-db.org/network/699218.HMPREF0889_1559 | Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. |
| EFD94013.1 protein network | https://string-db.org/network/699218.HMPREF0889_1560 | Hypothetical protein. |
| EFD94014.1 protein network | https://string-db.org/network/699218.HMPREF0889_1561 | Identified by match to protein family HMM PF01544. |
| EFD94015.1 protein network | https://string-db.org/network/699218.HMPREF0889_1562 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94016.1 protein network | https://string-db.org/network/699218.HMPREF0889_1563 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenas [...] |
| EFD94017.1 protein network | https://string-db.org/network/699218.HMPREF0889_1564 | Identified by match to protein family HMM PF07656. |
| EFD94018.1 protein network | https://string-db.org/network/699218.HMPREF0889_1565 | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. |
| EFD94019.1 protein network | https://string-db.org/network/699218.HMPREF0889_1566 | Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) fami [...] |
| EFD94020.1 protein network | https://string-db.org/network/699218.HMPREF0889_1567 | RND transporter, HAE1 family; Identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. |
| EFD94021.1 protein network | https://string-db.org/network/699218.HMPREF0889_1568 | Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797. |
| EFD94022.1 protein network | https://string-db.org/network/699218.HMPREF0889_1569 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94023.1 protein network | https://string-db.org/network/699218.HMPREF0889_1570 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94024.1 protein network | https://string-db.org/network/699218.HMPREF0889_1571 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD94025.1 protein network | https://string-db.org/network/699218.HMPREF0889_1572 | Hydrogenase, Fe-only; Identified by match to protein family HMM PF00037; match to protein family HMM PF02256; match to protein family HMM PF02906; match to protein family HMM TIGR02512. |
| sucD protein network | https://string-db.org/network/699218.HMPREF0889_1573 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171. |
| EFD94027.1 protein network | https://string-db.org/network/699218.HMPREF0889_1574 | Alcohol dehydrogenase, iron-dependent; Identified by match to protein family HMM PF00465. |
| EFD94028.1 protein network | https://string-db.org/network/699218.HMPREF0889_1575 | LytS/YhcK-type transmembrane receptor domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF06580; match to protein family HMM PF07694. |
| EFD94029.1 protein network | https://string-db.org/network/699218.HMPREF0889_1576 | LytTr DNA-binding domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF04397. |
| EFD94030.1 protein network | https://string-db.org/network/699218.HMPREF0889_1577 | Identified by match to protein family HMM PF01637. |
| EFD94031.1 protein network | https://string-db.org/network/699218.HMPREF0889_1578 | Hypothetical protein. |
| EFD94032.1 protein network | https://string-db.org/network/699218.HMPREF0889_1579 | Identified by match to protein family HMM PF00395. |
| tonB-9 protein network | https://string-db.org/network/699218.HMPREF0889_1580 | Putative colicin I receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. |
| EFD94034.1 protein network | https://string-db.org/network/699218.HMPREF0889_1581 | Hypothetical protein. |
| rpsO protein network | https://string-db.org/network/699218.HMPREF0889_1582 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. |
| pnp protein network | https://string-db.org/network/699218.HMPREF0889_1583 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. |
| dut protein network | https://string-db.org/network/699218.HMPREF0889_1584 | dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP s [...] |
| EFD94038.1 protein network | https://string-db.org/network/699218.HMPREF0889_1585 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. |
| deoB protein network | https://string-db.org/network/699218.HMPREF0889_1586 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. |
| pdp protein network | https://string-db.org/network/699218.HMPREF0889_1587 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR0 [...] |
| rumA protein network | https://string-db.org/network/699218.HMPREF0889_1588 | 23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF05958; match to protein family H [...] |
| EFD94042.1 protein network | https://string-db.org/network/699218.HMPREF0889_1589 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| EFD94043.1 protein network | https://string-db.org/network/699218.HMPREF0889_1590 | Hypothetical protein. |
| EFD94044.1 protein network | https://string-db.org/network/699218.HMPREF0889_1591 | Hypothetical protein. |
| cadA-2 protein network | https://string-db.org/network/699218.HMPREF0889_1592 | Cadmium-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match [...] |
| EFD94046.1 protein network | https://string-db.org/network/699218.HMPREF0889_1593 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94047.1 protein network | https://string-db.org/network/699218.HMPREF0889_1594 | Hypothetical protein. |
| sdhA protein network | https://string-db.org/network/699218.HMPREF0889_1595 | Succinate dehydrogenase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF07992. |
| sdhB protein network | https://string-db.org/network/699218.HMPREF0889_1596 | Succinate dehydrogenase iron-sulfur subunit; Identified by match to protein family HMM TIGR00384. |
| EFD94050.1 protein network | https://string-db.org/network/699218.HMPREF0889_1597 | Hypothetical protein. |
| EFD94051.1 protein network | https://string-db.org/network/699218.HMPREF0889_1598 | Hypothetical protein. |
| EFD94052.1 protein network | https://string-db.org/network/699218.HMPREF0889_1599 | Hypothetical protein. |
| dcm protein network | https://string-db.org/network/699218.HMPREF0889_1600 | DNA (cytosine-5-)-methyltransferase; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675. |
| EFD94054.1 protein network | https://string-db.org/network/699218.HMPREF0889_1601 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94055.1 protein network | https://string-db.org/network/699218.HMPREF0889_1602 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94056.1 protein network | https://string-db.org/network/699218.HMPREF0889_1603 | Hypothetical protein. |
| EFD94057.1 protein network | https://string-db.org/network/699218.HMPREF0889_1604 | Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432. |
| EFD94058.1 protein network | https://string-db.org/network/699218.HMPREF0889_1605 | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. |
| EFD94059.1 protein network | https://string-db.org/network/699218.HMPREF0889_1606 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. |
| EFD94060.1 protein network | https://string-db.org/network/699218.HMPREF0889_1607 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. |
| EFD94061.1 protein network | https://string-db.org/network/699218.HMPREF0889_1608 | Hypothetical protein. |
| EFD94062.1 protein network | https://string-db.org/network/699218.HMPREF0889_1609 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| pstS protein network | https://string-db.org/network/699218.HMPREF0889_1610 | Phosphate binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136. |
| pstC protein network | https://string-db.org/network/699218.HMPREF0889_1611 | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the memb [...] |
| pstA protein network | https://string-db.org/network/699218.HMPREF0889_1612 | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. |
| pstB protein network | https://string-db.org/network/699218.HMPREF0889_1613 | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the A [...] |
| phoU protein network | https://string-db.org/network/699218.HMPREF0889_1614 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. |
| EFD94068.1 protein network | https://string-db.org/network/699218.HMPREF0889_1615 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. |
| EFD94069.1 protein network | https://string-db.org/network/699218.HMPREF0889_1616 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518. |
| EFD94070.1 protein network | https://string-db.org/network/699218.HMPREF0889_1617 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94071.1 protein network | https://string-db.org/network/699218.HMPREF0889_1618 | Putative permease; Identified by match to protein family HMM PF00860. |
| EFD94072.1 protein network | https://string-db.org/network/699218.HMPREF0889_1619 | Identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255. |
| EFD94073.1 protein network | https://string-db.org/network/699218.HMPREF0889_1620 | Identified by match to protein family HMM PF04025; Belongs to the RemA family. |
| gmk protein network | https://string-db.org/network/699218.HMPREF0889_1621 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. |
| rpoZ protein network | https://string-db.org/network/699218.HMPREF0889_1622 | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and al [...] |
| coaBC protein network | https://string-db.org/network/699218.HMPREF0889_1623 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantot [...] |
| metK protein network | https://string-db.org/network/699218.HMPREF0889_1625 | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet format [...] |
| priA protein network | https://string-db.org/network/699218.HMPREF0889_1626 | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...] |
| def protein network | https://string-db.org/network/699218.HMPREF0889_1627 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...] |
| fmt protein network | https://string-db.org/network/699218.HMPREF0889_1628 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...] |
| sun protein network | https://string-db.org/network/699218.HMPREF0889_1629 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. |
| rlmN protein network | https://string-db.org/network/699218.HMPREF0889_1630 | 23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. |
| EFD94083.1 protein network | https://string-db.org/network/699218.HMPREF0889_1631 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. |
| EFD94084.1 protein network | https://string-db.org/network/699218.HMPREF0889_1632 | Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714. |
| rsgA protein network | https://string-db.org/network/699218.HMPREF0889_1633 | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature sub [...] |
| rpe protein network | https://string-db.org/network/699218.HMPREF0889_1634 | Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family. |
| ribD protein network | https://string-db.org/network/699218.HMPREF0889_1636 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-termi [...] |
| ribE protein network | https://string-db.org/network/699218.HMPREF0889_1637 | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. |
| ribH protein network | https://string-db.org/network/699218.HMPREF0889_1638 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...] |
| EFD94090.1 protein network | https://string-db.org/network/699218.HMPREF0889_1639 | Hypothetical protein; Identified by glimmer; putative. |
| ylqF protein network | https://string-db.org/network/699218.HMPREF0889_1640 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. |
| rnhB-2 protein network | https://string-db.org/network/699218.HMPREF0889_1641 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. |
| EFD94093.1 protein network | https://string-db.org/network/699218.HMPREF0889_1642 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| EFD94094.1 protein network | https://string-db.org/network/699218.HMPREF0889_1643 | Amidohydrolase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged [...] |
| nadE protein network | https://string-db.org/network/699218.HMPREF0889_1644 | NAD+ synthase; Identified by match to protein family HMM PF02540; match to protein family HMM PF06508; match to protein family HMM TIGR00552; Belongs to the NAD synthetase family. |
| EFD94096.1 protein network | https://string-db.org/network/699218.HMPREF0889_1645 | Flavin reductase; Identified by match to protein family HMM PF03358. |
| ctsR protein network | https://string-db.org/network/699218.HMPREF0889_1646 | Transcriptional repressor of CtsR. |
| EFD94098.1 protein network | https://string-db.org/network/699218.HMPREF0889_1647 | Hypothetical protein. |
| EFD94099.1 protein network | https://string-db.org/network/699218.HMPREF0889_1648 | ATP:guanido phosphotransferase, C-terminal catalytic domain protein; Identified by match to protein family HMM PF00217. |
| radA protein network | https://string-db.org/network/699218.HMPREF0889_1649 | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand [...] |
| EFD94101.1 protein network | https://string-db.org/network/699218.HMPREF0889_1650 | PIN domain protein; Identified by match to protein family HMM PF01850; match to protein family HMM PF01938. |
| ispF protein network | https://string-db.org/network/699218.HMPREF0889_1651 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phos [...] |
| gltX protein network | https://string-db.org/network/699218.HMPREF0889_1652 | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of [...] |
| cysS protein network | https://string-db.org/network/699218.HMPREF0889_1654 | cysteine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs [...] |
| mrnC protein network | https://string-db.org/network/699218.HMPREF0889_1655 | RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc proces [...] |
| EFD94106.1 protein network | https://string-db.org/network/699218.HMPREF0889_1656 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV [...] |
| EFD94107.1 protein network | https://string-db.org/network/699218.HMPREF0889_1657 | Identified by match to protein family HMM PF05991. |
| sigH protein network | https://string-db.org/network/699218.HMPREF0889_1658 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; match to protein family HMM TIGR02859; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor fami [...] |
| secG protein network | https://string-db.org/network/699218.HMPREF0889_1659 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. |
| rnr protein network | https://string-db.org/network/699218.HMPREF0889_1660 | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. |
| smpB protein network | https://string-db.org/network/699218.HMPREF0889_1661 | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...] |
| EFD94112.1 protein network | https://string-db.org/network/699218.HMPREF0889_1662 | Identified by match to protein family HMM PF03960; Belongs to the ArsC family. |
| EFD94113.1 protein network | https://string-db.org/network/699218.HMPREF0889_1663 | Hypothetical protein; Identified by glimmer; putative. |
| hslO protein network | https://string-db.org/network/699218.HMPREF0889_1664 | Chaperonin HslO; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial de [...] |
| mtnP protein network | https://string-db.org/network/699218.HMPREF0889_1665 | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate mol [...] |
| mtnA protein network | https://string-db.org/network/699218.HMPREF0889_1666 | S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). |
| ahcY protein network | https://string-db.org/network/699218.HMPREF0889_1667 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. |
| mtaD protein network | https://string-db.org/network/699218.HMPREF0889_1668 | Amidohydrolase family protein; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able [...] |
| lexA protein network | https://string-db.org/network/699218.HMPREF0889_1669 | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causin [...] |
| lysM protein network | https://string-db.org/network/699218.HMPREF0889_1670 | LysM domain protein; Identified by match to protein family HMM PF01476. |
| EFD94121.1 protein network | https://string-db.org/network/699218.HMPREF0889_1671 | Hypothetical protein. |
| mltG protein network | https://string-db.org/network/699218.HMPREF0889_1672 | YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. |
| EFD94123.1 protein network | https://string-db.org/network/699218.HMPREF0889_1673 | O-methyltransferase; Identified by match to protein family HMM PF01596. |
| EFD94124.1 protein network | https://string-db.org/network/699218.HMPREF0889_1674 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. |
| EFD94125.1 protein network | https://string-db.org/network/699218.HMPREF0889_1675 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94126.1 protein network | https://string-db.org/network/699218.HMPREF0889_1676 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94127.1 protein network | https://string-db.org/network/699218.HMPREF0889_1677 | DNA topoisomerase; Identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01056. |
| EFD94128.1 protein network | https://string-db.org/network/699218.HMPREF0889_1678 | Tetratricopeptide repeat protein. |
| dcd protein network | https://string-db.org/network/699218.HMPREF0889_1679 | dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. |
| EFD94130.1 protein network | https://string-db.org/network/699218.HMPREF0889_1680 | Peptidase family T4; Identified by match to protein family HMM PF03576. |
| EFD94131.1 protein network | https://string-db.org/network/699218.HMPREF0889_1681 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94132.1 protein network | https://string-db.org/network/699218.HMPREF0889_1682 | Hypothetical protein. |
| gap-2 protein network | https://string-db.org/network/699218.HMPREF0889_1683 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the gly [...] |
| EFD94134.1 protein network | https://string-db.org/network/699218.HMPREF0889_1684 | Glyceraldehyde 3-phosphate dehydrogenase domain protein; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; Belongs to the glyceraldehyde-3-phosphate dehydrog [...] |
| pgk protein network | https://string-db.org/network/699218.HMPREF0889_1685 | Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family. |
| tpiA protein network | https://string-db.org/network/699218.HMPREF0889_1686 | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to th [...] |
| EFD94137.1 protein network | https://string-db.org/network/699218.HMPREF0889_1687 | Hypothetical protein; Identified by glimmer; putative. |
| EFD94138.1 protein network | https://string-db.org/network/699218.HMPREF0889_1688 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF0 [...] |
| EFD94839.1 protein network | https://string-db.org/network/699218.HMPREF0889_1690 | Hemagglutinin; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05662. |