Organism Overview: Parcubacteria group bacterium CG2303638


 
OIP77324.1 protein networkhttps://string-db.org/network/1805316.AUK09_00005Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77336.1 protein networkhttps://string-db.org/network/1805316.AUK09_00010Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77325.1 protein networkhttps://string-db.org/network/1805316.AUK09_00015Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
queA protein networkhttps://string-db.org/network/1805316.AUK09_00020tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epo [...]
OIP77327.1 protein networkhttps://string-db.org/network/1805316.AUK09_00025Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77328.1 protein networkhttps://string-db.org/network/1805316.AUK09_00030Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
queH protein networkhttps://string-db.org/network/1805316.AUK09_00035Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr [...]
OIP77330.1 protein networkhttps://string-db.org/network/1805316.AUK09_00045Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77331.1 protein networkhttps://string-db.org/network/1805316.AUK09_00050Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77332.1 protein networkhttps://string-db.org/network/1805316.AUK09_00055Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
OIP77333.1 protein networkhttps://string-db.org/network/1805316.AUK09_00065Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77334.1 protein networkhttps://string-db.org/network/1805316.AUK09_00070Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77335.1 protein networkhttps://string-db.org/network/1805316.AUK09_00075Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
nadD protein networkhttps://string-db.org/network/1805316.AUK09_00085Hypothetical protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
ligA protein networkhttps://string-db.org/network/1805316.AUK09_00090Hypothetical protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the en [...]
OIP77291.1 protein networkhttps://string-db.org/network/1805316.AUK09_00095Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77292.1 protein networkhttps://string-db.org/network/1805316.AUK09_00100Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77293.1 protein networkhttps://string-db.org/network/1805316.AUK09_00105NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
AUK09_00115 protein networkhttps://string-db.org/network/1805316.AUK09_00115Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
smpB protein networkhttps://string-db.org/network/1805316.AUK09_00120SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
OIP77273.1 protein networkhttps://string-db.org/network/1805316.AUK09_00130Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family.
rplT protein networkhttps://string-db.org/network/1805316.AUK09_0013550S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing func [...]
OIP77270.1 protein networkhttps://string-db.org/network/1805316.AUK09_00145Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
cysS protein networkhttps://string-db.org/network/1805316.AUK09_00150cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
OIP77272.1 protein networkhttps://string-db.org/network/1805316.AUK09_00155Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77274.1 protein networkhttps://string-db.org/network/1805316.AUK09_00160Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
AUK09_00165 protein networkhttps://string-db.org/network/1805316.AUK09_00165RNA-binding protein; Metagenomic; derived from metagenome: groundwater metagenome.
OIP77251.1 protein networkhttps://string-db.org/network/1805316.AUK09_00170Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77252.1 protein networkhttps://string-db.org/network/1805316.AUK09_00175AmmeMemoRadiSam system protein B; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77253.1 protein networkhttps://string-db.org/network/1805316.AUK09_00180Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77254.1 protein networkhttps://string-db.org/network/1805316.AUK09_00185ATP-dependent chaperone ClpB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.
AUK09_00195 protein networkhttps://string-db.org/network/1805316.AUK09_00195Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
eno protein networkhttps://string-db.org/network/1805316.AUK09_00200Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the [...]
OIP77222.1 protein networkhttps://string-db.org/network/1805316.AUK09_00205Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
nnrD protein networkhttps://string-db.org/network/1805316.AUK09_00210NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerizat [...]
OIP77224.1 protein networkhttps://string-db.org/network/1805316.AUK09_00215Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
ftsZ protein networkhttps://string-db.org/network/1805316.AUK09_00220Hypothetical protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing an [...]
OIP77226.1 protein networkhttps://string-db.org/network/1805316.AUK09_00225Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77227.1 protein networkhttps://string-db.org/network/1805316.AUK09_00230Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77228.1 protein networkhttps://string-db.org/network/1805316.AUK09_00235Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
OIP77233.1 protein networkhttps://string-db.org/network/1805316.AUK09_00240Cell division ATP-binding protein FtsE; Derived by automated computational analysis using gene prediction method: Protein Homology.
prfB protein networkhttps://string-db.org/network/1805316.AUK09_00245Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
OIP77230.1 protein networkhttps://string-db.org/network/1805316.AUK09_00255Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77231.1 protein networkhttps://string-db.org/network/1805316.AUK09_00265Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
lepA protein networkhttps://string-db.org/network/1805316.AUK09_00270Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon bac [...]
gatA protein networkhttps://string-db.org/network/1805316.AUK09_00280Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
lysA protein networkhttps://string-db.org/network/1805316.AUK09_00285Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
OIP77201.1 protein networkhttps://string-db.org/network/1805316.AUK09_00290Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77202.1 protein networkhttps://string-db.org/network/1805316.AUK09_00295Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_00305 protein networkhttps://string-db.org/network/1805316.AUK09_00305Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
OIP77167.1 protein networkhttps://string-db.org/network/1805316.AUK09_00315Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77168.1 protein networkhttps://string-db.org/network/1805316.AUK09_00320Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rpmG protein networkhttps://string-db.org/network/1805316.AUK09_0032550S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.
OIP77170.1 protein networkhttps://string-db.org/network/1805316.AUK09_00335SMC-Scp complex subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid [...]
OIP77171.1 protein networkhttps://string-db.org/network/1805316.AUK09_00340Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell in [...]
OIP77172.1 protein networkhttps://string-db.org/network/1805316.AUK09_00345Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77173.1 protein networkhttps://string-db.org/network/1805316.AUK09_00355Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77174.1 protein networkhttps://string-db.org/network/1805316.AUK09_00365Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77175.1 protein networkhttps://string-db.org/network/1805316.AUK09_00370Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77176.1 protein networkhttps://string-db.org/network/1805316.AUK09_00375Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77177.1 protein networkhttps://string-db.org/network/1805316.AUK09_00380Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77178.1 protein networkhttps://string-db.org/network/1805316.AUK09_00385Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77179.1 protein networkhttps://string-db.org/network/1805316.AUK09_00390Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77180.1 protein networkhttps://string-db.org/network/1805316.AUK09_00395Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
lgt protein networkhttps://string-db.org/network/1805316.AUK09_00400Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
AUK09_00410 protein networkhttps://string-db.org/network/1805316.AUK09_00410Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
OIP77137.1 protein networkhttps://string-db.org/network/1805316.AUK09_00415Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77138.1 protein networkhttps://string-db.org/network/1805316.AUK09_00420Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77139.1 protein networkhttps://string-db.org/network/1805316.AUK09_00425Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77140.1 protein networkhttps://string-db.org/network/1805316.AUK09_00430Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77141.1 protein networkhttps://string-db.org/network/1805316.AUK09_00435Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77142.1 protein networkhttps://string-db.org/network/1805316.AUK09_00440Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77143.1 protein networkhttps://string-db.org/network/1805316.AUK09_00445Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77144.1 protein networkhttps://string-db.org/network/1805316.AUK09_00450Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77145.1 protein networkhttps://string-db.org/network/1805316.AUK09_00455Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77146.1 protein networkhttps://string-db.org/network/1805316.AUK09_00460Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77147.1 protein networkhttps://string-db.org/network/1805316.AUK09_00465Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77148.1 protein networkhttps://string-db.org/network/1805316.AUK09_00470Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77149.1 protein networkhttps://string-db.org/network/1805316.AUK09_00475Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_00480 protein networkhttps://string-db.org/network/1805316.AUK09_00480Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
OIP77107.1 protein networkhttps://string-db.org/network/1805316.AUK09_00485Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
pheA protein networkhttps://string-db.org/network/1805316.AUK09_00490Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77109.1 protein networkhttps://string-db.org/network/1805316.AUK09_00495Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
aroE protein networkhttps://string-db.org/network/1805316.AUK09_00505Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshiki [...]
aroK protein networkhttps://string-db.org/network/1805316.AUK09_00510Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
AUK09_00525 protein networkhttps://string-db.org/network/1805316.AUK09_00525Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77098.1 protein networkhttps://string-db.org/network/1805316.AUK09_00530Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77099.1 protein networkhttps://string-db.org/network/1805316.AUK09_00535Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77047.1 protein networkhttps://string-db.org/network/1805316.AUK09_00560Magnesium-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77048.1 protein networkhttps://string-db.org/network/1805316.AUK09_00565Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77049.1 protein networkhttps://string-db.org/network/1805316.AUK09_00570Nucleoside-diphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NDK family.
OIP77050.1 protein networkhttps://string-db.org/network/1805316.AUK09_00575Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
OIP77051.1 protein networkhttps://string-db.org/network/1805316.AUK09_00580Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77052.1 protein networkhttps://string-db.org/network/1805316.AUK09_00585Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77053.1 protein networkhttps://string-db.org/network/1805316.AUK09_00590Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
gatC protein networkhttps://string-db.org/network/1805316.AUK09_00600Hypothetical protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack eit [...]
OIP77055.1 protein networkhttps://string-db.org/network/1805316.AUK09_00605Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77056.1 protein networkhttps://string-db.org/network/1805316.AUK09_00610Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77057.1 protein networkhttps://string-db.org/network/1805316.AUK09_00615methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
rsmI protein networkhttps://string-db.org/network/1805316.AUK09_0062016S rRNA (cytidine(1402)-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
OIP77059.1 protein networkhttps://string-db.org/network/1805316.AUK09_00625Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
hisS protein networkhttps://string-db.org/network/1805316.AUK09_00640Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP77008.1 protein networkhttps://string-db.org/network/1805316.AUK09_00645Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77003.1 protein networkhttps://string-db.org/network/1805316.AUK09_00650Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
aspS protein networkhttps://string-db.org/network/1805316.AUK09_00655Hypothetical protein; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end [...]
OIP77005.1 protein networkhttps://string-db.org/network/1805316.AUK09_00660Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77006.1 protein networkhttps://string-db.org/network/1805316.AUK09_00665uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP77007.1 protein networkhttps://string-db.org/network/1805316.AUK09_00670NrdH-redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76939.1 protein networkhttps://string-db.org/network/1805316.AUK09_00680phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Typ [...]
OIP76940.1 protein networkhttps://string-db.org/network/1805316.AUK09_00685Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76941.1 protein networkhttps://string-db.org/network/1805316.AUK09_00690Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76942.1 protein networkhttps://string-db.org/network/1805316.AUK09_00695Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76943.1 protein networkhttps://string-db.org/network/1805316.AUK09_00700Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76944.1 protein networkhttps://string-db.org/network/1805316.AUK09_00705Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76945.1 protein networkhttps://string-db.org/network/1805316.AUK09_00710Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76946.1 protein networkhttps://string-db.org/network/1805316.AUK09_00715Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
AUK09_00720 protein networkhttps://string-db.org/network/1805316.AUK09_00720Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
OIP76899.1 protein networkhttps://string-db.org/network/1805316.AUK09_00725Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76907.1 protein networkhttps://string-db.org/network/1805316.AUK09_00730Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76900.1 protein networkhttps://string-db.org/network/1805316.AUK09_00735dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucos [...]
OIP76901.1 protein networkhttps://string-db.org/network/1805316.AUK09_00740Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76902.1 protein networkhttps://string-db.org/network/1805316.AUK09_00745dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
tgt protein networkhttps://string-db.org/network/1805316.AUK09_00750tRNA guanosine(34) transglycosylase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble posi [...]
OIP76904.1 protein networkhttps://string-db.org/network/1805316.AUK09_00755Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
recO protein networkhttps://string-db.org/network/1805316.AUK09_00760DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
OIP76906.1 protein networkhttps://string-db.org/network/1805316.AUK09_00765isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_00770 protein networkhttps://string-db.org/network/1805316.AUK09_00770Molecular chaperone DnaJ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belo [...]
OIP76876.1 protein networkhttps://string-db.org/network/1805316.AUK09_00775Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76877.1 protein networkhttps://string-db.org/network/1805316.AUK09_00780Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
dnaG protein networkhttps://string-db.org/network/1805316.AUK09_00785DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
OIP76879.1 protein networkhttps://string-db.org/network/1805316.AUK09_00790Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
rsmH protein networkhttps://string-db.org/network/1805316.AUK09_0079516S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
OIP76881.1 protein networkhttps://string-db.org/network/1805316.AUK09_00800Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rpsI protein networkhttps://string-db.org/network/1805316.AUK09_0080530S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.
OIP76883.1 protein networkhttps://string-db.org/network/1805316.AUK09_00810Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76884.1 protein networkhttps://string-db.org/network/1805316.AUK09_00815Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76885.1 protein networkhttps://string-db.org/network/1805316.AUK09_00820Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_00830 protein networkhttps://string-db.org/network/1805316.AUK09_00830Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76886.1 protein networkhttps://string-db.org/network/1805316.AUK09_00835Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76887.1 protein networkhttps://string-db.org/network/1805316.AUK09_00840Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76888.1 protein networkhttps://string-db.org/network/1805316.AUK09_00845Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76889.1 protein networkhttps://string-db.org/network/1805316.AUK09_00850Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76890.1 protein networkhttps://string-db.org/network/1805316.AUK09_00855Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76891.1 protein networkhttps://string-db.org/network/1805316.AUK09_00860Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
obg protein networkhttps://string-db.org/network/1805316.AUK09_00870Hypothetical protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role [...]
OIP76893.1 protein networkhttps://string-db.org/network/1805316.AUK09_00875Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplU protein networkhttps://string-db.org/network/1805316.AUK09_00885Hypothetical protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
ruvA protein networkhttps://string-db.org/network/1805316.AUK09_00890Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
OIP76829.1 protein networkhttps://string-db.org/network/1805316.AUK09_00895Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76830.1 protein networkhttps://string-db.org/network/1805316.AUK09_00900Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rpsT protein networkhttps://string-db.org/network/1805316.AUK09_00905Hypothetical protein; Binds directly to 16S ribosomal RNA.
OIP76832.1 protein networkhttps://string-db.org/network/1805316.AUK09_00915Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S11 family.
OIP76833.1 protein networkhttps://string-db.org/network/1805316.AUK09_00920Triose-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76834.1 protein networkhttps://string-db.org/network/1805316.AUK09_00925Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76835.1 protein networkhttps://string-db.org/network/1805316.AUK09_00930Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76836.1 protein networkhttps://string-db.org/network/1805316.AUK09_00935Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76837.1 protein networkhttps://string-db.org/network/1805316.AUK09_00940Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76838.1 protein networkhttps://string-db.org/network/1805316.AUK09_00945Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76839.1 protein networkhttps://string-db.org/network/1805316.AUK09_00965Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the MurCDEF family. MurE subfamily.
rpoB protein networkhttps://string-db.org/network/1805316.AUK09_00970DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoC protein networkhttps://string-db.org/network/1805316.AUK09_00975DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
OIP76842.1 protein networkhttps://string-db.org/network/1805316.AUK09_00980Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the FtsK/SpoIIIE/SftA family.
OIP76814.1 protein networkhttps://string-db.org/network/1805316.AUK09_00985Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76815.1 protein networkhttps://string-db.org/network/1805316.AUK09_00990Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76816.1 protein networkhttps://string-db.org/network/1805316.AUK09_00995Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76817.1 protein networkhttps://string-db.org/network/1805316.AUK09_01000Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76818.1 protein networkhttps://string-db.org/network/1805316.AUK09_01005single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76819.1 protein networkhttps://string-db.org/network/1805316.AUK09_01010serine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
lysS protein networkhttps://string-db.org/network/1805316.AUK09_01015lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
dnaA protein networkhttps://string-db.org/network/1805316.AUK09_01025Hypothetical protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp [...]
OIP76783.1 protein networkhttps://string-db.org/network/1805316.AUK09_01030Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76788.1 protein networkhttps://string-db.org/network/1805316.AUK09_01035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
valS protein networkhttps://string-db.org/network/1805316.AUK09_01040valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, [...]
tsaD protein networkhttps://string-db.org/network/1805316.AUK09_01050tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that [...]
OIP76786.1 protein networkhttps://string-db.org/network/1805316.AUK09_01055tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76787.1 protein networkhttps://string-db.org/network/1805316.AUK09_01060Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_01070 protein networkhttps://string-db.org/network/1805316.AUK09_01070Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
OIP76747.1 protein networkhttps://string-db.org/network/1805316.AUK09_01075Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76748.1 protein networkhttps://string-db.org/network/1805316.AUK09_01080Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
map protein networkhttps://string-db.org/network/1805316.AUK09_01085Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and u [...]
OIP76750.1 protein networkhttps://string-db.org/network/1805316.AUK09_01090AmmeMemoRadiSam system radical SAM enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76751.1 protein networkhttps://string-db.org/network/1805316.AUK09_01095Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
aroK-2 protein networkhttps://string-db.org/network/1805316.AUK09_01100Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
OIP76752.1 protein networkhttps://string-db.org/network/1805316.AUK09_01105Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76753.1 protein networkhttps://string-db.org/network/1805316.AUK09_01110Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76754.1 protein networkhttps://string-db.org/network/1805316.AUK09_01115Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0235 family.
OIP76755.1 protein networkhttps://string-db.org/network/1805316.AUK09_01120Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76756.1 protein networkhttps://string-db.org/network/1805316.AUK09_01125Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_01145 protein networkhttps://string-db.org/network/1805316.AUK09_01145Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76725.1 protein networkhttps://string-db.org/network/1805316.AUK09_01150Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
AUK09_01165 protein networkhttps://string-db.org/network/1805316.AUK09_01165Permease; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion [...]
OIP76728.1 protein networkhttps://string-db.org/network/1805316.AUK09_01170Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0251 family.
OIP76729.1 protein networkhttps://string-db.org/network/1805316.AUK09_01175Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76730.1 protein networkhttps://string-db.org/network/1805316.AUK09_01180Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76714.1 protein networkhttps://string-db.org/network/1805316.AUK09_01190Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76708.1 protein networkhttps://string-db.org/network/1805316.AUK09_01195threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SUA5 family.
infB protein networkhttps://string-db.org/network/1805316.AUK09_01200Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
OIP76710.1 protein networkhttps://string-db.org/network/1805316.AUK09_01205Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
murA protein networkhttps://string-db.org/network/1805316.AUK09_01210UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
OIP76712.1 protein networkhttps://string-db.org/network/1805316.AUK09_01215Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76713.1 protein networkhttps://string-db.org/network/1805316.AUK09_01220Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_01230 protein networkhttps://string-db.org/network/1805316.AUK09_01230tRNA-Ser; Metagenomic; derived from metagenome: groundwater metagenome.
OIP76683.1 protein networkhttps://string-db.org/network/1805316.AUK09_01235Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76684.1 protein networkhttps://string-db.org/network/1805316.AUK09_01240Redox-regulated ATPase YchF; Derived by automated computational analysis using gene prediction method: Protein Homology.
aroC protein networkhttps://string-db.org/network/1805316.AUK09_01245Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
ilvE protein networkhttps://string-db.org/network/1805316.AUK09_01250Branched chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
OIP76671.1 protein networkhttps://string-db.org/network/1805316.AUK09_01255Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
murJ protein networkhttps://string-db.org/network/1805316.AUK09_01260Murein biosynthesis integral membrane protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmi [...]
lepA-2 protein networkhttps://string-db.org/network/1805316.AUK09_01265Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon bac [...]
OIP76674.1 protein networkhttps://string-db.org/network/1805316.AUK09_01270Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76675.1 protein networkhttps://string-db.org/network/1805316.AUK09_01275Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
clpP protein networkhttps://string-db.org/network/1805316.AUK09_01285ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in [...]
rny protein networkhttps://string-db.org/network/1805316.AUK09_01290Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
OIP76646.1 protein networkhttps://string-db.org/network/1805316.AUK09_01295Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
rpmH protein networkhttps://string-db.org/network/1805316.AUK09_0130050S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family.
rnpA protein networkhttps://string-db.org/network/1805316.AUK09_01305Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
OIP76649.1 protein networkhttps://string-db.org/network/1805316.AUK09_01310Membrane protein insertion efficiency factor YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
OIP76650.1 protein networkhttps://string-db.org/network/1805316.AUK09_01315Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76651.1 protein networkhttps://string-db.org/network/1805316.AUK09_01320Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_01335 protein networkhttps://string-db.org/network/1805316.AUK09_01335glycine--tRNA ligase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pept [...]
OIP76582.1 protein networkhttps://string-db.org/network/1805316.AUK09_01340Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76583.1 protein networkhttps://string-db.org/network/1805316.AUK09_01345Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76584.1 protein networkhttps://string-db.org/network/1805316.AUK09_01350Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76585.1 protein networkhttps://string-db.org/network/1805316.AUK09_01355proline--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76586.1 protein networkhttps://string-db.org/network/1805316.AUK09_01360Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76587.1 protein networkhttps://string-db.org/network/1805316.AUK09_01365Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rnc protein networkhttps://string-db.org/network/1805316.AUK09_01370Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
OIP76589.1 protein networkhttps://string-db.org/network/1805316.AUK09_01380Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
tig protein networkhttps://string-db.org/network/1805316.AUK09_01385Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...]
OIP76591.1 protein networkhttps://string-db.org/network/1805316.AUK09_01390Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
nusA protein networkhttps://string-db.org/network/1805316.AUK09_01395Transcription termination factor NusA; Participates in both transcription termination and antitermination.
OIP76593.1 protein networkhttps://string-db.org/network/1805316.AUK09_01400Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76594.1 protein networkhttps://string-db.org/network/1805316.AUK09_01405Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76595.1 protein networkhttps://string-db.org/network/1805316.AUK09_01410Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76596.1 protein networkhttps://string-db.org/network/1805316.AUK09_01415Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76597.1 protein networkhttps://string-db.org/network/1805316.AUK09_01420Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76598.1 protein networkhttps://string-db.org/network/1805316.AUK09_01430Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76599.1 protein networkhttps://string-db.org/network/1805316.AUK09_01440Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76600.1 protein networkhttps://string-db.org/network/1805316.AUK09_01450AAA family ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76601.1 protein networkhttps://string-db.org/network/1805316.AUK09_01455Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76602.1 protein networkhttps://string-db.org/network/1805316.AUK09_01460Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76603.1 protein networkhttps://string-db.org/network/1805316.AUK09_01465Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76604.1 protein networkhttps://string-db.org/network/1805316.AUK09_01470Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76605.1 protein networkhttps://string-db.org/network/1805316.AUK09_01475Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76606.1 protein networkhttps://string-db.org/network/1805316.AUK09_01480DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76607.1 protein networkhttps://string-db.org/network/1805316.AUK09_01485Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76608.1 protein networkhttps://string-db.org/network/1805316.AUK09_01490Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
infA protein networkhttps://string-db.org/network/1805316.AUK09_01495Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
rpsM protein networkhttps://string-db.org/network/1805316.AUK09_0150030S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...]
rpsK protein networkhttps://string-db.org/network/1805316.AUK09_0150530S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsD protein networkhttps://string-db.org/network/1805316.AUK09_0151030S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
OIP76612.1 protein networkhttps://string-db.org/network/1805316.AUK09_01515DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
rplQ protein networkhttps://string-db.org/network/1805316.AUK09_0152050S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
rplM protein networkhttps://string-db.org/network/1805316.AUK09_0152550S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages [...]
OIP76615.1 protein networkhttps://string-db.org/network/1805316.AUK09_01535S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of th [...]
ftsE protein networkhttps://string-db.org/network/1805316.AUK09_01545Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
OIP76617.1 protein networkhttps://string-db.org/network/1805316.AUK09_01550Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
tmk protein networkhttps://string-db.org/network/1805316.AUK09_01555Hypothetical protein; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
rtcB protein networkhttps://string-db.org/network/1805316.AUK09_01560RNA-splicing ligase RtcB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RtcB family.
OIP76620.1 protein networkhttps://string-db.org/network/1805316.AUK09_01565Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76621.1 protein networkhttps://string-db.org/network/1805316.AUK09_01570Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
groS protein networkhttps://string-db.org/network/1805316.AUK09_01575Co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
groL protein networkhttps://string-db.org/network/1805316.AUK09_01580Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
OIP76624.1 protein networkhttps://string-db.org/network/1805316.AUK09_01585Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_01595 protein networkhttps://string-db.org/network/1805316.AUK09_01595Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
topA protein networkhttps://string-db.org/network/1805316.AUK09_01600DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
OIP76566.1 protein networkhttps://string-db.org/network/1805316.AUK09_01605Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76567.1 protein networkhttps://string-db.org/network/1805316.AUK09_01610UDP-N-acetylmuramoylalanine--D-glutamate ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the MurCDEF family.
AUK09_01625 protein networkhttps://string-db.org/network/1805316.AUK09_01625Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the unive [...]
rplK protein networkhttps://string-db.org/network/1805316.AUK09_0163050S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
nusG protein networkhttps://string-db.org/network/1805316.AUK09_01635Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination.
secE protein networkhttps://string-db.org/network/1805316.AUK09_01640Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
OIP76550.1 protein networkhttps://string-db.org/network/1805316.AUK09_01645DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
ftsA protein networkhttps://string-db.org/network/1805316.AUK09_01650Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
OIP76552.1 protein networkhttps://string-db.org/network/1805316.AUK09_01655Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76553.1 protein networkhttps://string-db.org/network/1805316.AUK09_01660Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
secF protein networkhttps://string-db.org/network/1805316.AUK09_01665Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
secD protein networkhttps://string-db.org/network/1805316.AUK09_01670Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
OIP76556.1 protein networkhttps://string-db.org/network/1805316.AUK09_01675Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76521.1 protein networkhttps://string-db.org/network/1805316.AUK09_01680Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplY protein networkhttps://string-db.org/network/1805316.AUK09_01685Hypothetical protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. [...]
OIP76523.1 protein networkhttps://string-db.org/network/1805316.AUK09_01690Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76524.1 protein networkhttps://string-db.org/network/1805316.AUK09_01695Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76525.1 protein networkhttps://string-db.org/network/1805316.AUK09_01700Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
recX protein networkhttps://string-db.org/network/1805316.AUK09_01705Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
OIP76533.1 protein networkhttps://string-db.org/network/1805316.AUK09_01710Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76527.1 protein networkhttps://string-db.org/network/1805316.AUK09_01715Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
tsf protein networkhttps://string-db.org/network/1805316.AUK09_01720Hypothetical protein; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the [...]
OIP76529.1 protein networkhttps://string-db.org/network/1805316.AUK09_017252-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76530.1 protein networkhttps://string-db.org/network/1805316.AUK09_01730Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
rtcA protein networkhttps://string-db.org/network/1805316.AUK09_01735RNA 3'-terminal-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenyl [...]
OIP76532.1 protein networkhttps://string-db.org/network/1805316.AUK09_01740Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DNA glycosylase MPG family.
OIP76511.1 protein networkhttps://string-db.org/network/1805316.AUK09_01750Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76512.1 protein networkhttps://string-db.org/network/1805316.AUK09_01765Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76513.1 protein networkhttps://string-db.org/network/1805316.AUK09_01770Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
OIP76514.1 protein networkhttps://string-db.org/network/1805316.AUK09_01775Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76515.1 protein networkhttps://string-db.org/network/1805316.AUK09_01780Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the helicase family. UvrD subfamily.
OIP76516.1 protein networkhttps://string-db.org/network/1805316.AUK09_01785Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76517.1 protein networkhttps://string-db.org/network/1805316.AUK09_01790phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_01800 protein networkhttps://string-db.org/network/1805316.AUK09_01800Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76486.1 protein networkhttps://string-db.org/network/1805316.AUK09_01805Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76487.1 protein networkhttps://string-db.org/network/1805316.AUK09_01810Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76488.1 protein networkhttps://string-db.org/network/1805316.AUK09_01815Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76489.1 protein networkhttps://string-db.org/network/1805316.AUK09_01820aminoacyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
rbfA protein networkhttps://string-db.org/network/1805316.AUK09_01825Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
OIP76491.1 protein networkhttps://string-db.org/network/1805316.AUK09_01830Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
OIP76492.1 protein networkhttps://string-db.org/network/1805316.AUK09_01835Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76493.1 protein networkhttps://string-db.org/network/1805316.AUK09_01840DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76494.1 protein networkhttps://string-db.org/network/1805316.AUK09_01845Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
thrS protein networkhttps://string-db.org/network/1805316.AUK09_01850threonine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
OIP76496.1 protein networkhttps://string-db.org/network/1805316.AUK09_01855tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76497.1 protein networkhttps://string-db.org/network/1805316.AUK09_01860Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
miaA protein networkhttps://string-db.org/network/1805316.AUK09_01865tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to [...]
gatB protein networkhttps://string-db.org/network/1805316.AUK09_01870glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu [...]
OIP76500.1 protein networkhttps://string-db.org/network/1805316.AUK09_01875Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the eIF-2B alpha/beta/delta subunits family.
OIP76501.1 protein networkhttps://string-db.org/network/1805316.AUK09_01880Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76502.1 protein networkhttps://string-db.org/network/1805316.AUK09_01885Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
fmt protein networkhttps://string-db.org/network/1805316.AUK09_01890methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
AUK09_01905 protein networkhttps://string-db.org/network/1805316.AUK09_01905LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; incomplete; too short [...]
OIP76453.1 protein networkhttps://string-db.org/network/1805316.AUK09_01910Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76454.1 protein networkhttps://string-db.org/network/1805316.AUK09_01915Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76455.1 protein networkhttps://string-db.org/network/1805316.AUK09_01920Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76456.1 protein networkhttps://string-db.org/network/1805316.AUK09_01925Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_01935 protein networkhttps://string-db.org/network/1805316.AUK09_01935Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76434.1 protein networkhttps://string-db.org/network/1805316.AUK09_01940Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76435.1 protein networkhttps://string-db.org/network/1805316.AUK09_01945Cysteine desulfurase NifS; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76436.1 protein networkhttps://string-db.org/network/1805316.AUK09_01950Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
mnmA protein networkhttps://string-db.org/network/1805316.AUK09_01955tRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
OIP76438.1 protein networkhttps://string-db.org/network/1805316.AUK09_01965Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76439.1 protein networkhttps://string-db.org/network/1805316.AUK09_01970Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76440.1 protein networkhttps://string-db.org/network/1805316.AUK09_01975Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
recR protein networkhttps://string-db.org/network/1805316.AUK09_01980Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
OIP76442.1 protein networkhttps://string-db.org/network/1805316.AUK09_01985Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
secA protein networkhttps://string-db.org/network/1805316.AUK09_01995Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
OIP76408.1 protein networkhttps://string-db.org/network/1805316.AUK09_02000Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76409.1 protein networkhttps://string-db.org/network/1805316.AUK09_02005Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76410.1 protein networkhttps://string-db.org/network/1805316.AUK09_02010Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76411.1 protein networkhttps://string-db.org/network/1805316.AUK09_02015Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rsmA protein networkhttps://string-db.org/network/1805316.AUK09_02020Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S part [...]
OIP76413.1 protein networkhttps://string-db.org/network/1805316.AUK09_02025Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76414.1 protein networkhttps://string-db.org/network/1805316.AUK09_02030Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76415.1 protein networkhttps://string-db.org/network/1805316.AUK09_02035Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76416.1 protein networkhttps://string-db.org/network/1805316.AUK09_02040Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76417.1 protein networkhttps://string-db.org/network/1805316.AUK09_02045Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76418.1 protein networkhttps://string-db.org/network/1805316.AUK09_02050Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplX protein networkhttps://string-db.org/network/1805316.AUK09_02060IS30 family transposase; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
rplN protein networkhttps://string-db.org/network/1805316.AUK09_0206550S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rpsQ protein networkhttps://string-db.org/network/1805316.AUK09_0207030S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rpmC protein networkhttps://string-db.org/network/1805316.AUK09_0207550S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.
rplP protein networkhttps://string-db.org/network/1805316.AUK09_0208050S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpsC protein networkhttps://string-db.org/network/1805316.AUK09_0208530S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplV protein networkhttps://string-db.org/network/1805316.AUK09_0209050S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wal [...]
rpsS protein networkhttps://string-db.org/network/1805316.AUK09_0209530S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
OIP76371.1 protein networkhttps://string-db.org/network/1805316.AUK09_0210050S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
rplW protein networkhttps://string-db.org/network/1805316.AUK09_0210550S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main dock [...]
rplD protein networkhttps://string-db.org/network/1805316.AUK09_0211050S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
rplC protein networkhttps://string-db.org/network/1805316.AUK09_0211550S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal rib [...]
rpsJ protein networkhttps://string-db.org/network/1805316.AUK09_0212030S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
tuf protein networkhttps://string-db.org/network/1805316.AUK09_02125Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
fusA protein networkhttps://string-db.org/network/1805316.AUK09_02130Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
rpsG protein networkhttps://string-db.org/network/1805316.AUK09_0213530S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit inte [...]
rpsL protein networkhttps://string-db.org/network/1805316.AUK09_0214030S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S an [...]
OIP76380.1 protein networkhttps://string-db.org/network/1805316.AUK09_02145Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
mraY protein networkhttps://string-db.org/network/1805316.AUK09_02150phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
OIP76382.1 protein networkhttps://string-db.org/network/1805316.AUK09_02155Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76383.1 protein networkhttps://string-db.org/network/1805316.AUK09_0216050S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76384.1 protein networkhttps://string-db.org/network/1805316.AUK09_02165Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S41A family.
ruvB protein networkhttps://string-db.org/network/1805316.AUK09_02170Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
OIP76386.1 protein networkhttps://string-db.org/network/1805316.AUK09_02175DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a [...]
OIP76387.1 protein networkhttps://string-db.org/network/1805316.AUK09_02180tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tR [...]
OIP76388.1 protein networkhttps://string-db.org/network/1805316.AUK09_02185Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76389.1 protein networkhttps://string-db.org/network/1805316.AUK09_02195Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
trmD protein networkhttps://string-db.org/network/1805316.AUK09_02205tRNA (guanosine(37)-N1)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
OIP76391.1 protein networkhttps://string-db.org/network/1805316.AUK09_02210RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0109 family.
rpsP protein networkhttps://string-db.org/network/1805316.AUK09_0221530S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.
OIP76393.1 protein networkhttps://string-db.org/network/1805316.AUK09_02220Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76394.1 protein networkhttps://string-db.org/network/1805316.AUK09_02225Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplE protein networkhttps://string-db.org/network/1805316.AUK09_02230Hypothetical protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In [...]
rpsZ protein networkhttps://string-db.org/network/1805316.AUK09_0223530S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
OIP76326.1 protein networkhttps://string-db.org/network/1805316.AUK09_0224030S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS8 family.
OIP76327.1 protein networkhttps://string-db.org/network/1805316.AUK09_0224550S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the t [...]
rplR protein networkhttps://string-db.org/network/1805316.AUK09_0225050S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protubera [...]
OIP76329.1 protein networkhttps://string-db.org/network/1805316.AUK09_02255Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS5 family.
OIP76330.1 protein networkhttps://string-db.org/network/1805316.AUK09_02260Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
secY protein networkhttps://string-db.org/network/1805316.AUK09_02265Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at t [...]
adk protein networkhttps://string-db.org/network/1805316.AUK09_02270Hypothetical protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metab [...]
OIP76333.1 protein networkhttps://string-db.org/network/1805316.AUK09_02275Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76334.1 protein networkhttps://string-db.org/network/1805316.AUK09_02280Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76335.1 protein networkhttps://string-db.org/network/1805316.AUK09_02285Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76336.1 protein networkhttps://string-db.org/network/1805316.AUK09_02290Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
AUK09_02300 protein networkhttps://string-db.org/network/1805316.AUK09_02300LD-carboxypeptidase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
murB protein networkhttps://string-db.org/network/1805316.AUK09_02305UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
OIP76278.1 protein networkhttps://string-db.org/network/1805316.AUK09_02310Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76279.1 protein networkhttps://string-db.org/network/1805316.AUK09_02315Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76280.1 protein networkhttps://string-db.org/network/1805316.AUK09_02320Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
aroD protein networkhttps://string-db.org/network/1805316.AUK09_02325Hypothetical protein; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and i [...]
OIP76282.1 protein networkhttps://string-db.org/network/1805316.AUK09_02330Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
lspA protein networkhttps://string-db.org/network/1805316.AUK09_02335Hypothetical protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
OIP76284.1 protein networkhttps://string-db.org/network/1805316.AUK09_02340Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76285.1 protein networkhttps://string-db.org/network/1805316.AUK09_02345Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76286.1 protein networkhttps://string-db.org/network/1805316.AUK09_02350Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76287.1 protein networkhttps://string-db.org/network/1805316.AUK09_02355Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76288.1 protein networkhttps://string-db.org/network/1805316.AUK09_02360Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76289.1 protein networkhttps://string-db.org/network/1805316.AUK09_02365DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadin [...]
OIP76290.1 protein networkhttps://string-db.org/network/1805316.AUK09_02370Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
OIP76291.1 protein networkhttps://string-db.org/network/1805316.AUK09_02385Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
efp protein networkhttps://string-db.org/network/1805316.AUK09_02390Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirect [...]
rpsR protein networkhttps://string-db.org/network/1805316.AUK09_0239530S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosom [...]
OIP76294.1 protein networkhttps://string-db.org/network/1805316.AUK09_02400Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76295.1 protein networkhttps://string-db.org/network/1805316.AUK09_0240530S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76296.1 protein networkhttps://string-db.org/network/1805316.AUK09_02410Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76297.1 protein networkhttps://string-db.org/network/1805316.AUK09_02415Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76298.1 protein networkhttps://string-db.org/network/1805316.AUK09_02420Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76299.1 protein networkhttps://string-db.org/network/1805316.AUK09_02425Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76300.1 protein networkhttps://string-db.org/network/1805316.AUK09_02430Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76301.1 protein networkhttps://string-db.org/network/1805316.AUK09_02435Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76302.1 protein networkhttps://string-db.org/network/1805316.AUK09_02440Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
ruvC protein networkhttps://string-db.org/network/1805316.AUK09_02445Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to st [...]
glgA protein networkhttps://string-db.org/network/1805316.AUK09_02450Hypothetical protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
OIP76304.1 protein networkhttps://string-db.org/network/1805316.AUK09_02455Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76305.1 protein networkhttps://string-db.org/network/1805316.AUK09_02460Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
glgA-2 protein networkhttps://string-db.org/network/1805316.AUK09_02465Hypothetical protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
OIP76307.1 protein networkhttps://string-db.org/network/1805316.AUK09_02470Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76308.1 protein networkhttps://string-db.org/network/1805316.AUK09_02475Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76309.1 protein networkhttps://string-db.org/network/1805316.AUK09_02480Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76310.1 protein networkhttps://string-db.org/network/1805316.AUK09_02485protein-L-isoaspartate O-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76311.1 protein networkhttps://string-db.org/network/1805316.AUK09_02490Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76233.1 protein networkhttps://string-db.org/network/1805316.AUK09_02500arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-I aminoacyl-tRNA synthetase family.
OIP76234.1 protein networkhttps://string-db.org/network/1805316.AUK09_02505Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76235.1 protein networkhttps://string-db.org/network/1805316.AUK09_02510Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NDK family.
OIP76236.1 protein networkhttps://string-db.org/network/1805316.AUK09_02515Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76237.1 protein networkhttps://string-db.org/network/1805316.AUK09_02520Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76238.1 protein networkhttps://string-db.org/network/1805316.AUK09_02525Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenas [...]
dnaK protein networkhttps://string-db.org/network/1805316.AUK09_02530Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
grpE protein networkhttps://string-db.org/network/1805316.AUK09_02535Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE [...]
murG protein networkhttps://string-db.org/network/1805316.AUK09_02540Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide [...]
AUK09_02550 protein networkhttps://string-db.org/network/1805316.AUK09_02550Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76214.1 protein networkhttps://string-db.org/network/1805316.AUK09_02555Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family. ECF subfamily.
OIP76215.1 protein networkhttps://string-db.org/network/1805316.AUK09_02560Histidine triad nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
hisS-2 protein networkhttps://string-db.org/network/1805316.AUK09_02565histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76217.1 protein networkhttps://string-db.org/network/1805316.AUK09_02570Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
OIP76218.1 protein networkhttps://string-db.org/network/1805316.AUK09_02575Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76219.1 protein networkhttps://string-db.org/network/1805316.AUK09_02580Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OIP76220.1 protein networkhttps://string-db.org/network/1805316.AUK09_02585Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
pnp protein networkhttps://string-db.org/network/1805316.AUK09_02590Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
OIP76222.1 protein networkhttps://string-db.org/network/1805316.AUK09_02595Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
rpsO protein networkhttps://string-db.org/network/1805316.AUK09_0260030S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
OIP76224.1 protein networkhttps://string-db.org/network/1805316.AUK09_02605Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OIP76225.1 protein networkhttps://string-db.org/network/1805316.AUK09_02610Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplL protein networkhttps://string-db.org/network/1805316.AUK09_0261550S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the ba [...]
rplJ protein networkhttps://string-db.org/network/1805316.AUK09_0262050S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal prot [...]
OIP76228.1 protein networkhttps://string-db.org/network/1805316.AUK09_02625Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.