Organism Overview: Ignavibacteria bacterium GWA25525


 
OGU19323.1 protein networkhttps://string-db.org/network/1798422.A2059_0000523S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class IV-like SAM-binding methyltransf [...]
OGU19324.1 protein networkhttps://string-db.org/network/1798422.A2059_00010Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19325.1 protein networkhttps://string-db.org/network/1798422.A2059_00015Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19326.1 protein networkhttps://string-db.org/network/1798422.A2059_00020methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
speE protein networkhttps://string-db.org/network/1798422.A2059_00025Hypothetical protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermi [...]
OGU19293.1 protein networkhttps://string-db.org/network/1798422.A2059_00030Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
efp protein networkhttps://string-db.org/network/1798422.A2059_00035Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirect [...]
OGU19295.1 protein networkhttps://string-db.org/network/1798422.A2059_00040acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the car [...]
OGU19296.1 protein networkhttps://string-db.org/network/1798422.A2059_00045acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier p [...]
gcvH protein networkhttps://string-db.org/network/1798422.A2059_00050Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
A2059_00060 protein networkhttps://string-db.org/network/1798422.A2059_00060Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
OGU19148.1 protein networkhttps://string-db.org/network/1798422.A2059_00065Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type [...]
OGU19149.1 protein networkhttps://string-db.org/network/1798422.A2059_00070Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19150.1 protein networkhttps://string-db.org/network/1798422.A2059_00075Na+-dependent transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19151.1 protein networkhttps://string-db.org/network/1798422.A2059_00080Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19152.1 protein networkhttps://string-db.org/network/1798422.A2059_00085Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19153.1 protein networkhttps://string-db.org/network/1798422.A2059_00090Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
mutS protein networkhttps://string-db.org/network/1798422.A2059_00095DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
proC protein networkhttps://string-db.org/network/1798422.A2059_00100Hypothetical protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
leuB protein networkhttps://string-db.org/network/1798422.A2059_001053-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...]
rplM protein networkhttps://string-db.org/network/1798422.A2059_0011050S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages [...]
rpsI protein networkhttps://string-db.org/network/1798422.A2059_0011530S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.
rpsB protein networkhttps://string-db.org/network/1798422.A2059_0012030S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.
tsf protein networkhttps://string-db.org/network/1798422.A2059_00125Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...]
pyrH protein networkhttps://string-db.org/network/1798422.A2059_00130UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
frr protein networkhttps://string-db.org/network/1798422.A2059_00135Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
polA protein networkhttps://string-db.org/network/1798422.A2059_00140DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
A2059_00150 protein networkhttps://string-db.org/network/1798422.A2059_00150Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19215.1 protein networkhttps://string-db.org/network/1798422.A2059_00155Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19216.1 protein networkhttps://string-db.org/network/1798422.A2059_00160Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19217.1 protein networkhttps://string-db.org/network/1798422.A2059_00165Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19218.1 protein networkhttps://string-db.org/network/1798422.A2059_00170Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19220.1 protein networkhttps://string-db.org/network/1798422.A2059_00175Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
A2059_00190 protein networkhttps://string-db.org/network/1798422.A2059_00190Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18735.1 protein networkhttps://string-db.org/network/1798422.A2059_00195Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase g [...]
A2059_00205 protein networkhttps://string-db.org/network/1798422.A2059_00205Ammonia permease; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18737.1 protein networkhttps://string-db.org/network/1798422.A2059_00210Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_00220 protein networkhttps://string-db.org/network/1798422.A2059_00220Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19022.1 protein networkhttps://string-db.org/network/1798422.A2059_00225Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19006.1 protein networkhttps://string-db.org/network/1798422.A2059_00230Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19007.1 protein networkhttps://string-db.org/network/1798422.A2059_00235Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
guaA protein networkhttps://string-db.org/network/1798422.A2059_00240Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
OGU19009.1 protein networkhttps://string-db.org/network/1798422.A2059_00245ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19010.1 protein networkhttps://string-db.org/network/1798422.A2059_00250Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19011.1 protein networkhttps://string-db.org/network/1798422.A2059_00255Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19012.1 protein networkhttps://string-db.org/network/1798422.A2059_00260Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19023.1 protein networkhttps://string-db.org/network/1798422.A2059_00265Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.
OGU19013.1 protein networkhttps://string-db.org/network/1798422.A2059_00270Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19014.1 protein networkhttps://string-db.org/network/1798422.A2059_00275Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19015.1 protein networkhttps://string-db.org/network/1798422.A2059_00280Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19016.1 protein networkhttps://string-db.org/network/1798422.A2059_00285Nucleoside triphosphate pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19017.1 protein networkhttps://string-db.org/network/1798422.A2059_00290Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19018.1 protein networkhttps://string-db.org/network/1798422.A2059_00305Ribonuclease G; Derived by automated computational analysis using gene prediction method: Protein Homology.
tal protein networkhttps://string-db.org/network/1798422.A2059_00310Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
gcvT protein networkhttps://string-db.org/network/1798422.A2059_00315Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
comB protein networkhttps://string-db.org/network/1798422.A2059_00320Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ComB family.
OGU19021.1 protein networkhttps://string-db.org/network/1798422.A2059_00325Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the FtsK/SpoIIIE/SftA family.
A2059_00330 protein networkhttps://string-db.org/network/1798422.A2059_00330Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
OGU19275.1 protein networkhttps://string-db.org/network/1798422.A2059_00335Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19276.1 protein networkhttps://string-db.org/network/1798422.A2059_00340Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19277.1 protein networkhttps://string-db.org/network/1798422.A2059_00345Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19279.1 protein networkhttps://string-db.org/network/1798422.A2059_00350Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19278.1 protein networkhttps://string-db.org/network/1798422.A2059_00355Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_00365 protein networkhttps://string-db.org/network/1798422.A2059_00365Twitching motility protein PilT; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19060.1 protein networkhttps://string-db.org/network/1798422.A2059_00370Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19061.1 protein networkhttps://string-db.org/network/1798422.A2059_00375Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial secretin family.
OGU19062.1 protein networkhttps://string-db.org/network/1798422.A2059_00380Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
hemL protein networkhttps://string-db.org/network/1798422.A2059_00385Glutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19064.1 protein networkhttps://string-db.org/network/1798422.A2059_00390Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_00395 protein networkhttps://string-db.org/network/1798422.A2059_00395Cytochrome B; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is co [...]
OGU18566.1 protein networkhttps://string-db.org/network/1798422.A2059_00400Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18567.1 protein networkhttps://string-db.org/network/1798422.A2059_00405Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18568.1 protein networkhttps://string-db.org/network/1798422.A2059_00410Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18569.1 protein networkhttps://string-db.org/network/1798422.A2059_00415Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18570.1 protein networkhttps://string-db.org/network/1798422.A2059_00420Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
ispE protein networkhttps://string-db.org/network/1798422.A2059_004254-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
kdsA protein networkhttps://string-db.org/network/1798422.A2059_004303-deoxy-8-phosphooctulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.
OGU18573.1 protein networkhttps://string-db.org/network/1798422.A2059_00435Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18574.1 protein networkhttps://string-db.org/network/1798422.A2059_00440Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18575.1 protein networkhttps://string-db.org/network/1798422.A2059_00445D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.
OGU18576.1 protein networkhttps://string-db.org/network/1798422.A2059_00450LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_00460 protein networkhttps://string-db.org/network/1798422.A2059_00460Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18592.1 protein networkhttps://string-db.org/network/1798422.A2059_00465Ammonia-forming cytochrome c nitrite reductase subunit c552; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome c-552 family.
OGU18585.1 protein networkhttps://string-db.org/network/1798422.A2059_00470Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18586.1 protein networkhttps://string-db.org/network/1798422.A2059_00475Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18587.1 protein networkhttps://string-db.org/network/1798422.A2059_00480Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18593.1 protein networkhttps://string-db.org/network/1798422.A2059_00485Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18588.1 protein networkhttps://string-db.org/network/1798422.A2059_00490Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18589.1 protein networkhttps://string-db.org/network/1798422.A2059_00495Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18590.1 protein networkhttps://string-db.org/network/1798422.A2059_00500Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18591.1 protein networkhttps://string-db.org/network/1798422.A2059_00505Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_00520 protein networkhttps://string-db.org/network/1798422.A2059_00520Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18841.1 protein networkhttps://string-db.org/network/1798422.A2059_00525Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18921.1 protein networkhttps://string-db.org/network/1798422.A2059_00535Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18914.1 protein networkhttps://string-db.org/network/1798422.A2059_00540Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
pyrE protein networkhttps://string-db.org/network/1798422.A2059_00545Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
OGU18916.1 protein networkhttps://string-db.org/network/1798422.A2059_00550Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18917.1 protein networkhttps://string-db.org/network/1798422.A2059_00555Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18918.1 protein networkhttps://string-db.org/network/1798422.A2059_00560Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18919.1 protein networkhttps://string-db.org/network/1798422.A2059_00565Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18920.1 protein networkhttps://string-db.org/network/1798422.A2059_00570Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_00580 protein networkhttps://string-db.org/network/1798422.A2059_00580Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
glgA protein networkhttps://string-db.org/network/1798422.A2059_00585Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
OGU18981.1 protein networkhttps://string-db.org/network/1798422.A2059_00590Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18972.1 protein networkhttps://string-db.org/network/1798422.A2059_00595Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18973.1 protein networkhttps://string-db.org/network/1798422.A2059_00600Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18974.1 protein networkhttps://string-db.org/network/1798422.A2059_00605Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18975.1 protein networkhttps://string-db.org/network/1798422.A2059_00610Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
glyA protein networkhttps://string-db.org/network/1798422.A2059_00615Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major so [...]
tatC protein networkhttps://string-db.org/network/1798422.A2059_00620Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in th [...]
OGU18977.1 protein networkhttps://string-db.org/network/1798422.A2059_00625Polyprenyl synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
OGU18983.1 protein networkhttps://string-db.org/network/1798422.A2059_00630Stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
ilvE protein networkhttps://string-db.org/network/1798422.A2059_00635Branched chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
OGU18985.1 protein networkhttps://string-db.org/network/1798422.A2059_00640Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18978.1 protein networkhttps://string-db.org/network/1798422.A2059_006458-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18986.1 protein networkhttps://string-db.org/network/1798422.A2059_00650Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
crcB protein networkhttps://string-db.org/network/1798422.A2059_00655Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
OGU18979.1 protein networkhttps://string-db.org/network/1798422.A2059_00660Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18980.1 protein networkhttps://string-db.org/network/1798422.A2059_00665Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_00670 protein networkhttps://string-db.org/network/1798422.A2059_00670tRNA-Met; Metagenomic; derived from metagenome: subsurface metagenome; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
OGU18783.1 protein networkhttps://string-db.org/network/1798422.A2059_00675Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18784.1 protein networkhttps://string-db.org/network/1798422.A2059_00680Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18785.1 protein networkhttps://string-db.org/network/1798422.A2059_00685Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18786.1 protein networkhttps://string-db.org/network/1798422.A2059_00690glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18787.1 protein networkhttps://string-db.org/network/1798422.A2059_00695Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18788.1 protein networkhttps://string-db.org/network/1798422.A2059_00700Hypothetical protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the [...]
OGU18897.1 protein networkhttps://string-db.org/network/1798422.A2059_00705Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18898.1 protein networkhttps://string-db.org/network/1798422.A2059_00710Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
recG protein networkhttps://string-db.org/network/1798422.A2059_00720ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwindin [...]
OGU19367.1 protein networkhttps://string-db.org/network/1798422.A2059_00725D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
OGU19358.1 protein networkhttps://string-db.org/network/1798422.A2059_00730Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19359.1 protein networkhttps://string-db.org/network/1798422.A2059_00735Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19360.1 protein networkhttps://string-db.org/network/1798422.A2059_00740Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19368.1 protein networkhttps://string-db.org/network/1798422.A2059_00745Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19361.1 protein networkhttps://string-db.org/network/1798422.A2059_00750Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19362.1 protein networkhttps://string-db.org/network/1798422.A2059_00755Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19363.1 protein networkhttps://string-db.org/network/1798422.A2059_00760Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19364.1 protein networkhttps://string-db.org/network/1798422.A2059_00765Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19369.1 protein networkhttps://string-db.org/network/1798422.A2059_00770Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19365.1 protein networkhttps://string-db.org/network/1798422.A2059_00775Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
OGU19366.1 protein networkhttps://string-db.org/network/1798422.A2059_00780Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19241.1 protein networkhttps://string-db.org/network/1798422.A2059_00785Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19242.1 protein networkhttps://string-db.org/network/1798422.A2059_00790Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19243.1 protein networkhttps://string-db.org/network/1798422.A2059_00795Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
clpX protein networkhttps://string-db.org/network/1798422.A2059_00800ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the ab [...]
clpP protein networkhttps://string-db.org/network/1798422.A2059_00805ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in [...]
tig protein networkhttps://string-db.org/network/1798422.A2059_00810Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...]
OGU19247.1 protein networkhttps://string-db.org/network/1798422.A2059_00820Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19248.1 protein networkhttps://string-db.org/network/1798422.A2059_00825Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.
A2059_00830 protein networkhttps://string-db.org/network/1798422.A2059_00830Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
OGU19070.1 protein networkhttps://string-db.org/network/1798422.A2059_00835Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19071.1 protein networkhttps://string-db.org/network/1798422.A2059_00840Four helix bundle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19072.1 protein networkhttps://string-db.org/network/1798422.A2059_00845Aerotolerance regulator BatA; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19073.1 protein networkhttps://string-db.org/network/1798422.A2059_00850Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19074.1 protein networkhttps://string-db.org/network/1798422.A2059_00855Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19075.1 protein networkhttps://string-db.org/network/1798422.A2059_00860ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
A2059_00875 protein networkhttps://string-db.org/network/1798422.A2059_00875Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aldeh [...]
OGU19392.1 protein networkhttps://string-db.org/network/1798422.A2059_00880Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
OGU19393.1 protein networkhttps://string-db.org/network/1798422.A2059_008852-alkenal reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
plsY protein networkhttps://string-db.org/network/1798422.A2059_00890Hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phospha [...]
gpsA protein networkhttps://string-db.org/network/1798422.A2059_00895Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase fam [...]
plsY-2 protein networkhttps://string-db.org/network/1798422.A2059_00900Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). Th [...]
ispD protein networkhttps://string-db.org/network/1798422.A2059_009052-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
queA protein networkhttps://string-db.org/network/1798422.A2059_00910tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epo [...]
A2059_00920 protein networkhttps://string-db.org/network/1798422.A2059_00920Pyruvate, phosphate dikinase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
lpxK protein networkhttps://string-db.org/network/1798422.A2059_00925Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis [...]
lpxB protein networkhttps://string-db.org/network/1798422.A2059_00930lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...]
OGU19402.1 protein networkhttps://string-db.org/network/1798422.A2059_00935Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19403.1 protein networkhttps://string-db.org/network/1798422.A2059_00940Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
smc protein networkhttps://string-db.org/network/1798422.A2059_00945Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
nuoD protein networkhttps://string-db.org/network/1798422.A2059_00955NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the en [...]
nuoC protein networkhttps://string-db.org/network/1798422.A2059_00960NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this specie [...]
nuoB protein networkhttps://string-db.org/network/1798422.A2059_00965NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this specie [...]
nuoA protein networkhttps://string-db.org/network/1798422.A2059_00970NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the en [...]
ruvC protein networkhttps://string-db.org/network/1798422.A2059_00980Transcription elongation factor GreA; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands wit [...]
OGU18514.1 protein networkhttps://string-db.org/network/1798422.A2059_00985Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18526.1 protein networkhttps://string-db.org/network/1798422.A2059_00990single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18515.1 protein networkhttps://string-db.org/network/1798422.A2059_01000Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18516.1 protein networkhttps://string-db.org/network/1798422.A2059_01005Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18517.1 protein networkhttps://string-db.org/network/1798422.A2059_01010Nif3-like dinuclear metal center hexameric protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GTP cyclohydrolase I type 2/NIF3 fam [...]
OGU18518.1 protein networkhttps://string-db.org/network/1798422.A2059_01015Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18519.1 protein networkhttps://string-db.org/network/1798422.A2059_01020Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18520.1 protein networkhttps://string-db.org/network/1798422.A2059_01025Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18521.1 protein networkhttps://string-db.org/network/1798422.A2059_01030acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
guaB protein networkhttps://string-db.org/network/1798422.A2059_01035IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleoti [...]
A2059_01045 protein networkhttps://string-db.org/network/1798422.A2059_01045Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
purD protein networkhttps://string-db.org/network/1798422.A2059_01050Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.
OGU18524.1 protein networkhttps://string-db.org/network/1798422.A2059_01055UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18525.1 protein networkhttps://string-db.org/network/1798422.A2059_01060GTPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18541.1 protein networkhttps://string-db.org/network/1798422.A2059_01070glutamate--tRNA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-I aminoacyl-tRNA synthetase family.
glnS protein networkhttps://string-db.org/network/1798422.A2059_01075glutamine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18558.1 protein networkhttps://string-db.org/network/1798422.A2059_01080Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
OGU18542.1 protein networkhttps://string-db.org/network/1798422.A2059_010852-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18543.1 protein networkhttps://string-db.org/network/1798422.A2059_01090Deoxyadenosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18544.1 protein networkhttps://string-db.org/network/1798422.A2059_01095Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
asnS protein networkhttps://string-db.org/network/1798422.A2059_01100asparagine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18546.1 protein networkhttps://string-db.org/network/1798422.A2059_01105Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18547.1 protein networkhttps://string-db.org/network/1798422.A2059_01110Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18559.1 protein networkhttps://string-db.org/network/1798422.A2059_01115Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for eve [...]
nuoK protein networkhttps://string-db.org/network/1798422.A2059_01120NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the en [...]
OGU18549.1 protein networkhttps://string-db.org/network/1798422.A2059_01125NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18550.1 protein networkhttps://string-db.org/network/1798422.A2059_01130NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18560.1 protein networkhttps://string-db.org/network/1798422.A2059_01135Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
nuoN protein networkhttps://string-db.org/network/1798422.A2059_01140Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this spec [...]
nnrE protein networkhttps://string-db.org/network/1798422.A2059_01145Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converte [...]
OGU18553.1 protein networkhttps://string-db.org/network/1798422.A2059_01150Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18554.1 protein networkhttps://string-db.org/network/1798422.A2059_01155Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
tgt protein networkhttps://string-db.org/network/1798422.A2059_01160tRNA guanosine(34) transglycosylase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble posi [...]
OGU18561.1 protein networkhttps://string-db.org/network/1798422.A2059_01165Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.
ribBA protein networkhttps://string-db.org/network/1798422.A2059_01170Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C- [...]
prs protein networkhttps://string-db.org/network/1798422.A2059_01190tRNA-Gln; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phospha [...]
rplY protein networkhttps://string-db.org/network/1798422.A2059_01195Hypothetical protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. [...]
pth protein networkhttps://string-db.org/network/1798422.A2059_01200aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
hppA protein networkhttps://string-db.org/network/1798422.A2059_01205Sodium-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocati [...]
rpsF protein networkhttps://string-db.org/network/1798422.A2059_0121030S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
rpsR protein networkhttps://string-db.org/network/1798422.A2059_0121530S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosom [...]
rplI protein networkhttps://string-db.org/network/1798422.A2059_0122050S ribosomal protein L9; Binds to the 23S rRNA.
OGU18499.1 protein networkhttps://string-db.org/network/1798422.A2059_012252-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18501.1 protein networkhttps://string-db.org/network/1798422.A2059_012302-oxoacid:ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18500.1 protein networkhttps://string-db.org/network/1798422.A2059_01235Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
A2059_01240 protein networkhttps://string-db.org/network/1798422.A2059_01240Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
OGU18854.1 protein networkhttps://string-db.org/network/1798422.A2059_01245Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiA prenyltransferase family.
OGU18855.1 protein networkhttps://string-db.org/network/1798422.A2059_01250methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
mutL protein networkhttps://string-db.org/network/1798422.A2059_01255Hypothetical protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a pro [...]
OGU18857.1 protein networkhttps://string-db.org/network/1798422.A2059_01260Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
ftsY protein networkhttps://string-db.org/network/1798422.A2059_01270Dipeptide epimerase; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle ( [...]
OGU18859.1 protein networkhttps://string-db.org/network/1798422.A2059_01275Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
purF protein networkhttps://string-db.org/network/1798422.A2059_01280Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
OGU18861.1 protein networkhttps://string-db.org/network/1798422.A2059_01285Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
coaE protein networkhttps://string-db.org/network/1798422.A2059_01290dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
rny protein networkhttps://string-db.org/network/1798422.A2059_01295Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
OGU18864.1 protein networkhttps://string-db.org/network/1798422.A2059_01300Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of th [...]
OGU18865.1 protein networkhttps://string-db.org/network/1798422.A2059_01305Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
pheT protein networkhttps://string-db.org/network/1798422.A2059_01310phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit famil [...]
pheS protein networkhttps://string-db.org/network/1798422.A2059_01315phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe [...]
rplT protein networkhttps://string-db.org/network/1798422.A2059_0132050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing func [...]
rpmI protein networkhttps://string-db.org/network/1798422.A2059_0132550S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.
infC protein networkhttps://string-db.org/network/1798422.A2059_01330Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enha [...]
thrS protein networkhttps://string-db.org/network/1798422.A2059_01335threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end [...]
OGU18871.1 protein networkhttps://string-db.org/network/1798422.A2059_01345Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18872.1 protein networkhttps://string-db.org/network/1798422.A2059_01365Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_01370 protein networkhttps://string-db.org/network/1798422.A2059_01370Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
OGU18807.1 protein networkhttps://string-db.org/network/1798422.A2059_01375Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18808.1 protein networkhttps://string-db.org/network/1798422.A2059_01380Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18809.1 protein networkhttps://string-db.org/network/1798422.A2059_01385Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18810.1 protein networkhttps://string-db.org/network/1798422.A2059_01390Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18811.1 protein networkhttps://string-db.org/network/1798422.A2059_01395Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18812.1 protein networkhttps://string-db.org/network/1798422.A2059_01400Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18813.1 protein networkhttps://string-db.org/network/1798422.A2059_01405Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.
rimO protein networkhttps://string-db.org/network/1798422.A2059_01410Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
OGU18815.1 protein networkhttps://string-db.org/network/1798422.A2059_01415Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18816.1 protein networkhttps://string-db.org/network/1798422.A2059_01420Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18817.1 protein networkhttps://string-db.org/network/1798422.A2059_01425Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rnhB protein networkhttps://string-db.org/network/1798422.A2059_01430Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
OGU18819.1 protein networkhttps://string-db.org/network/1798422.A2059_01435YraN family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.
OGU18827.1 protein networkhttps://string-db.org/network/1798422.A2059_01440Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and [...]
OGU18820.1 protein networkhttps://string-db.org/network/1798422.A2059_01445Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18821.1 protein networkhttps://string-db.org/network/1798422.A2059_01450Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18822.1 protein networkhttps://string-db.org/network/1798422.A2059_01455Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18823.1 protein networkhttps://string-db.org/network/1798422.A2059_01460Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18824.1 protein networkhttps://string-db.org/network/1798422.A2059_01465Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18828.1 protein networkhttps://string-db.org/network/1798422.A2059_01470Dolichol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
A2059_01480 protein networkhttps://string-db.org/network/1798422.A2059_01480Cell division protein FtsH; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belo [...]
OGU18826.1 protein networkhttps://string-db.org/network/1798422.A2059_01485Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2059_01505 protein networkhttps://string-db.org/network/1798422.A2059_01505Short-chain dehydrogenase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18750.1 protein networkhttps://string-db.org/network/1798422.A2059_01510Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18751.1 protein networkhttps://string-db.org/network/1798422.A2059_01515Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
A2059_01525 protein networkhttps://string-db.org/network/1798422.A2059_01525Macrolide ABC transporter ATP-binding protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18753.1 protein networkhttps://string-db.org/network/1798422.A2059_01530Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
OGU18754.1 protein networkhttps://string-db.org/network/1798422.A2059_01535Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18755.1 protein networkhttps://string-db.org/network/1798422.A2059_01540tRNA nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
OGU18756.1 protein networkhttps://string-db.org/network/1798422.A2059_01545Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18757.1 protein networkhttps://string-db.org/network/1798422.A2059_01550Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18758.1 protein networkhttps://string-db.org/network/1798422.A2059_01555Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18759.1 protein networkhttps://string-db.org/network/1798422.A2059_01560Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18760.1 protein networkhttps://string-db.org/network/1798422.A2059_01565Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using [...]
OGU18761.1 protein networkhttps://string-db.org/network/1798422.A2059_01570Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18768.1 protein networkhttps://string-db.org/network/1798422.A2059_01575SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18762.1 protein networkhttps://string-db.org/network/1798422.A2059_01580Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18763.1 protein networkhttps://string-db.org/network/1798422.A2059_01585Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family. ECF subfamily.
OGU18764.1 protein networkhttps://string-db.org/network/1798422.A2059_01590Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18765.1 protein networkhttps://string-db.org/network/1798422.A2059_01595Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18766.1 protein networkhttps://string-db.org/network/1798422.A2059_01600Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18767.1 protein networkhttps://string-db.org/network/1798422.A2059_01605Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of [...]
OGU18640.1 protein networkhttps://string-db.org/network/1798422.A2059_01610Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rpsO protein networkhttps://string-db.org/network/1798422.A2059_0161530S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
OGU18642.1 protein networkhttps://string-db.org/network/1798422.A2059_01620Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.
truB protein networkhttps://string-db.org/network/1798422.A2059_01625tRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subf [...]
rbfA protein networkhttps://string-db.org/network/1798422.A2059_01630Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
infB protein networkhttps://string-db.org/network/1798422.A2059_01635Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
nusA protein networkhttps://string-db.org/network/1798422.A2059_01640Transcription termination factor NusA; Participates in both transcription termination and antitermination.
rimP protein networkhttps://string-db.org/network/1798422.A2059_01645Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
OGU18647.1 protein networkhttps://string-db.org/network/1798422.A2059_01650Rossman fold protein, TIGR00730 family; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the LOG family.
OGU18648.1 protein networkhttps://string-db.org/network/1798422.A2059_01655Anthranilate/aminodeoxychorismate synthase component II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotran [...]
trpE protein networkhttps://string-db.org/network/1798422.A2059_01660Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first [...]
OGU18650.1 protein networkhttps://string-db.org/network/1798422.A2059_01665Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18651.1 protein networkhttps://string-db.org/network/1798422.A2059_01670Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
lnt protein networkhttps://string-db.org/network/1798422.A2059_01675Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrol [...]
OGU18653.1 protein networkhttps://string-db.org/network/1798422.A2059_01680Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18654.1 protein networkhttps://string-db.org/network/1798422.A2059_01685Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
ispF protein networkhttps://string-db.org/network/1798422.A2059_016902-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...]
OGU18655.1 protein networkhttps://string-db.org/network/1798422.A2059_01695Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18656.1 protein networkhttps://string-db.org/network/1798422.A2059_01700Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18657.1 protein networkhttps://string-db.org/network/1798422.A2059_01715Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
lolD protein networkhttps://string-db.org/network/1798422.A2059_01720ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfami [...]
OGU18658.1 protein networkhttps://string-db.org/network/1798422.A2059_01725Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18659.1 protein networkhttps://string-db.org/network/1798422.A2059_01730Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
prfB protein networkhttps://string-db.org/network/1798422.A2059_01735Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
OGU18661.1 protein networkhttps://string-db.org/network/1798422.A2059_01740Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18662.1 protein networkhttps://string-db.org/network/1798422.A2059_01745ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
aspS protein networkhttps://string-db.org/network/1798422.A2059_01750aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L [...]
OGU18664.1 protein networkhttps://string-db.org/network/1798422.A2059_01755Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
OGU18665.1 protein networkhttps://string-db.org/network/1798422.A2059_01760DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
proS protein networkhttps://string-db.org/network/1798422.A2059_01765proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA( [...]
OGU18667.1 protein networkhttps://string-db.org/network/1798422.A2059_01770DNA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
A2059_01785 protein networkhttps://string-db.org/network/1798422.A2059_01785Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19266.1 protein networkhttps://string-db.org/network/1798422.A2059_01790Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18939.1 protein networkhttps://string-db.org/network/1798422.A2059_01805Glycine dehydrogenase (aminomethyl-transferring); Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvP family.
rnc protein networkhttps://string-db.org/network/1798422.A2059_01810Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
OGU18940.1 protein networkhttps://string-db.org/network/1798422.A2059_01815Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
acpP protein networkhttps://string-db.org/network/1798422.A2059_01820Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
OGU18942.1 protein networkhttps://string-db.org/network/1798422.A2059_018253-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
OGU18943.1 protein networkhttps://string-db.org/network/1798422.A2059_01830[acyl-carrier-protein] S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
fabH protein networkhttps://string-db.org/network/1798422.A2059_018353-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction [...]
plsX protein networkhttps://string-db.org/network/1798422.A2059_01840Phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, [...]
OGU18946.1 protein networkhttps://string-db.org/network/1798422.A2059_01845Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18947.1 protein networkhttps://string-db.org/network/1798422.A2059_01850Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18948.1 protein networkhttps://string-db.org/network/1798422.A2059_01855Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18949.1 protein networkhttps://string-db.org/network/1798422.A2059_01860Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
ribH protein networkhttps://string-db.org/network/1798422.A2059_018656,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
OGU18956.1 protein networkhttps://string-db.org/network/1798422.A2059_01870Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18951.1 protein networkhttps://string-db.org/network/1798422.A2059_01875Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18952.1 protein networkhttps://string-db.org/network/1798422.A2059_01880Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18953.1 protein networkhttps://string-db.org/network/1798422.A2059_01885Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU18957.1 protein networkhttps://string-db.org/network/1798422.A2059_01890Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU18954.1 protein networkhttps://string-db.org/network/1798422.A2059_01895Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
secE protein networkhttps://string-db.org/network/1798422.A2059_01925Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
nusG protein networkhttps://string-db.org/network/1798422.A2059_01930Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
rplK protein networkhttps://string-db.org/network/1798422.A2059_0193550S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
rplA protein networkhttps://string-db.org/network/1798422.A2059_0194050S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplJ protein networkhttps://string-db.org/network/1798422.A2059_0194550S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal prot [...]
rplL protein networkhttps://string-db.org/network/1798422.A2059_0195050S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the ba [...]
rpoB protein networkhttps://string-db.org/network/1798422.A2059_01955DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoC protein networkhttps://string-db.org/network/1798422.A2059_01960DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpsL protein networkhttps://string-db.org/network/1798422.A2059_0196530S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S an [...]
rpsG protein networkhttps://string-db.org/network/1798422.A2059_0197030S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit inte [...]
fusA protein networkhttps://string-db.org/network/1798422.A2059_01975Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
tuf protein networkhttps://string-db.org/network/1798422.A2059_01980Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
rpsJ protein networkhttps://string-db.org/network/1798422.A2059_0198530S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
rplC protein networkhttps://string-db.org/network/1798422.A2059_0199050S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal rib [...]
rplD protein networkhttps://string-db.org/network/1798422.A2059_0199550S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
rplW protein networkhttps://string-db.org/network/1798422.A2059_0200050S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main dock [...]
rplB protein networkhttps://string-db.org/network/1798422.A2059_0200550S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It [...]
rpsS protein networkhttps://string-db.org/network/1798422.A2059_0201030S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplV protein networkhttps://string-db.org/network/1798422.A2059_0201550S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wal [...]
rpsC protein networkhttps://string-db.org/network/1798422.A2059_0202030S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplP protein networkhttps://string-db.org/network/1798422.A2059_0202550S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpmC protein networkhttps://string-db.org/network/1798422.A2059_0203050S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.
rpsQ protein networkhttps://string-db.org/network/1798422.A2059_0203530S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rplN protein networkhttps://string-db.org/network/1798422.A2059_0204050S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rplX protein networkhttps://string-db.org/network/1798422.A2059_0204550S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
rplE protein networkhttps://string-db.org/network/1798422.A2059_0205050S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance [...]
rpsZ protein networkhttps://string-db.org/network/1798422.A2059_0205530S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
rpsH protein networkhttps://string-db.org/network/1798422.A2059_0206030S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to [...]
rplF protein networkhttps://string-db.org/network/1798422.A2059_0206550S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the t [...]
rplR protein networkhttps://string-db.org/network/1798422.A2059_0207050S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protubera [...]
rpsE protein networkhttps://string-db.org/network/1798422.A2059_0207530S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 fam [...]
OGU19106.1 protein networkhttps://string-db.org/network/1798422.A2059_0208050S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.
rplO protein networkhttps://string-db.org/network/1798422.A2059_0208550S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
secY protein networkhttps://string-db.org/network/1798422.A2059_02090Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at t [...]
map protein networkhttps://string-db.org/network/1798422.A2059_02095Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and u [...]
infA protein networkhttps://string-db.org/network/1798422.A2059_02100Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
rpmJ protein networkhttps://string-db.org/network/1798422.A2059_0210550S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.
rpsM protein networkhttps://string-db.org/network/1798422.A2059_0211030S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...]
rpsK protein networkhttps://string-db.org/network/1798422.A2059_0211530S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsD protein networkhttps://string-db.org/network/1798422.A2059_0212030S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpoA protein networkhttps://string-db.org/network/1798422.A2059_02125DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplQ protein networkhttps://string-db.org/network/1798422.A2059_0213050S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
engB protein networkhttps://string-db.org/network/1798422.A2059_02135Hypothetical protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase fa [...]
OGU19116.1 protein networkhttps://string-db.org/network/1798422.A2059_02140Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19117.1 protein networkhttps://string-db.org/network/1798422.A2059_02145Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
OGU19118.1 protein networkhttps://string-db.org/network/1798422.A2059_02150GxxExxY protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGU19119.1 protein networkhttps://string-db.org/network/1798422.A2059_02155Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGU19120.1 protein networkhttps://string-db.org/network/1798422.A2059_02160Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.