15 items (Ursus americanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDC27	Cell division cycle 27. (729 aa)
	CDC16	Cell division cycle 16. (624 aa)
	ENSUAMP00000033824	CDT1 domain-containing protein. (780 aa)
	NSMCE2	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (157 aa)
	ENSUAMP00000021561	RING-type domain-containing protein. (84 aa)
	ENSUAMP00000020522	Uncharacterized protein. (135 aa)
	RB1	RB transcriptional corepressor 1. (870 aa)
	ANAPC7	Anaphase promoting complex subunit 7. (586 aa)
	ENSUAMP00000010748	Uncharacterized protein. (49 aa)
	ENSUAMP00000003375	Uncharacterized protein. (90 aa)
	ANAPC5	Anaphase promoting complex subunit 5. (727 aa)
	MAD2L1BP	MAD2L1 binding protein. (274 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	ENSUAMP00000002462	Uncharacterized protein. (120 aa)
	ENSUAMP00000002455	TPR_REGION domain-containing protein. (149 aa)

Your Current Organism:

Ursus americanus

NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANAPC5	ANAPC7	ENSUAMP00000018417	ENSUAMP00000013583	Anaphase promoting complex subunit 5.	Anaphase promoting complex subunit 7.	0.998
ANAPC5	CDC16	ENSUAMP00000018417	ENSUAMP00000018910	Anaphase promoting complex subunit 5.	Cell division cycle 16.	0.998
ANAPC5	CDC27	ENSUAMP00000018417	ENSUAMP00000010730	Anaphase promoting complex subunit 5.	Cell division cycle 27.	0.998
ANAPC5	ENSUAMP00000002455	ENSUAMP00000018417	ENSUAMP00000002455	Anaphase promoting complex subunit 5.	TPR_REGION domain-containing protein.	0.962
ANAPC5	ENSUAMP00000002462	ENSUAMP00000018417	ENSUAMP00000002462	Anaphase promoting complex subunit 5.	Uncharacterized protein.	0.996
ANAPC5	ENSUAMP00000010748	ENSUAMP00000018417	ENSUAMP00000010748	Anaphase promoting complex subunit 5.	Uncharacterized protein.	0.903
ANAPC5	ENSUAMP00000021561	ENSUAMP00000018417	ENSUAMP00000021561	Anaphase promoting complex subunit 5.	RING-type domain-containing protein.	0.998
ANAPC5	ENSUAMP00000033824	ENSUAMP00000018417	ENSUAMP00000033824	Anaphase promoting complex subunit 5.	CDT1 domain-containing protein.	0.513
ANAPC7	ANAPC5	ENSUAMP00000013583	ENSUAMP00000018417	Anaphase promoting complex subunit 7.	Anaphase promoting complex subunit 5.	0.998
ANAPC7	CDC16	ENSUAMP00000013583	ENSUAMP00000018910	Anaphase promoting complex subunit 7.	Cell division cycle 16.	0.999
ANAPC7	CDC27	ENSUAMP00000013583	ENSUAMP00000010730	Anaphase promoting complex subunit 7.	Cell division cycle 27.	0.999
ANAPC7	ENSUAMP00000002455	ENSUAMP00000013583	ENSUAMP00000002455	Anaphase promoting complex subunit 7.	TPR_REGION domain-containing protein.	0.985
ANAPC7	ENSUAMP00000002462	ENSUAMP00000013583	ENSUAMP00000002462	Anaphase promoting complex subunit 7.	Uncharacterized protein.	0.996
ANAPC7	ENSUAMP00000003375	ENSUAMP00000013583	ENSUAMP00000003375	Anaphase promoting complex subunit 7.	Uncharacterized protein.	0.991
ANAPC7	ENSUAMP00000010748	ENSUAMP00000013583	ENSUAMP00000010748	Anaphase promoting complex subunit 7.	Uncharacterized protein.	0.946
ANAPC7	ENSUAMP00000021561	ENSUAMP00000013583	ENSUAMP00000021561	Anaphase promoting complex subunit 7.	RING-type domain-containing protein.	0.993
ANAPC7	ENSUAMP00000033824	ENSUAMP00000013583	ENSUAMP00000033824	Anaphase promoting complex subunit 7.	CDT1 domain-containing protein.	0.604
CDC16	ANAPC5	ENSUAMP00000018910	ENSUAMP00000018417	Cell division cycle 16.	Anaphase promoting complex subunit 5.	0.998
CDC16	ANAPC7	ENSUAMP00000018910	ENSUAMP00000013583	Cell division cycle 16.	Anaphase promoting complex subunit 7.	0.999
CDC16	CDC27	ENSUAMP00000018910	ENSUAMP00000010730	Cell division cycle 16.	Cell division cycle 27.	0.999