STRINGSTRING
SVI_0426 SVI_0426 SVI_0180 SVI_0180 SVI_1510 SVI_1510 SVI_2519 SVI_2519 SVI_2556 SVI_2556 SVI_3778 SVI_3778
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_0426SpoIIAA family protein. (100 aa)
SVI_0180Hypothetical protein. (104 aa)
SVI_1510Anti-anti-sigma factor family; Belongs to the anti-sigma-factor antagonist family. (113 aa)
SVI_2519Conserved hypothetical protein. (123 aa)
SVI_2556Sulfate permease family protein. (518 aa)
SVI_3778Conserved hypothetical protein. (125 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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