(38 nodes) Myeloid leukocyte migration network (Opisthocomus hoazin)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N306_02373	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1810 aa)
	N306_05164	Galectin. (267 aa)
	N306_08624	Platelet endothelial cell adhesion molecule. (692 aa)
	N306_13761	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (612 aa)
	N306_10457	Rab5 GDP/GTP exchange factor. (491 aa)
	CXCL8-3	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (94 aa)
	N306_07427	Tyrosine-protein kinase. (611 aa)
	N306_05044	Tyrosine-protein kinase transmembrane receptor ROR2. (778 aa)
	N306_00608	Interleukin-1 receptor-associated kinase 4. (435 aa)
	N306_03855	Integrin alpha-9; Belongs to the integrin alpha chain family. (975 aa)
	N306_14664	Receptor-type tyrosine-protein phosphatase O. (1200 aa)
	N306_06206	Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family. (252 aa)
	N306_10325	Junctional adhesion molecule C. (293 aa)
	N306_11254	C-C motif chemokine 19. (78 aa)
	N306_09545	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (281 aa)
	N306_11910	Interleukin-17F. (160 aa)
	N306_10725	Rho guanine nucleotide exchange factor 5. (525 aa)
	N306_00507	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (949 aa)
	N306_09883	Lymphotactin. (72 aa)
	N306_02603	Annexin. (320 aa)
	N306_01873	C-C motif chemokine. (84 aa)
	N306_12043	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (431 aa)
	N306_12462	Junctional adhesion molecule-like. (215 aa)
	N306_01814	Glucose-6-phosphate translocase. (306 aa)
	N306_07705	Coxsackievirus and adenovirus receptor. (351 aa)
	N306_07187	Protein FAM19A4. (115 aa)
	N306_05512	Epithelial membrane protein 2. (167 aa)
	N306_11014	Interleukin-17 receptor A. (790 aa)
	N306_06292	Uncharacterized protein. (88 aa)
	N306_15617	Lissencephaly-1. (399 aa)
	N306_11594	Transforming growth factor beta; Belongs to the TGF-beta family. (412 aa)
	N306_10184	1-phosphatidylinositol 3-phosphate 5-kinase. (2108 aa)
	N306_03072	Mucolipin-2. (535 aa)
	N306_07794	Prostate-associated microseminoprotein. (99 aa)
	SRP54	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
	N306_14096	Secretogranin-2. (627 aa)
	N306_01875	C-C motif chemokine. (65 aa)
	N306_07981	C-C motif chemokine. (64 aa)

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CXCL8-3	N306_01873	A0A091XI49	A0A091WGD4	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.	C-C motif chemokine.	0.632
CXCL8-3	N306_01875	A0A091XI49	A0A091VDZ1	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.	C-C motif chemokine.	0.556
CXCL8-3	N306_06292	A0A091XI49	A0A091W552	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.	Uncharacterized protein.	0.493
CXCL8-3	N306_07981	A0A091XI49	A0A091V6B6	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.	C-C motif chemokine.	0.548
CXCL8-3	N306_11254	A0A091XI49	A0A091WN19	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.	C-C motif chemokine 19.	0.469
N306_00507	N306_06206	A0A091WK05	A0A091WQL2	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family.	0.433
N306_00507	N306_08624	A0A091WK05	A0A091XKX5	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Platelet endothelial cell adhesion molecule.	0.459
N306_00608	N306_07427	A0A091WRB6	A0A091XGS8	Interleukin-1 receptor-associated kinase 4.	Tyrosine-protein kinase.	0.590
N306_01873	CXCL8-3	A0A091WGD4	A0A091XI49	C-C motif chemokine.	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.	0.632
N306_01873	N306_01875	A0A091WGD4	A0A091VDZ1	C-C motif chemokine.	C-C motif chemokine.	0.871
N306_01873	N306_06292	A0A091WGD4	A0A091W552	C-C motif chemokine.	Uncharacterized protein.	0.675
N306_01873	N306_07981	A0A091WGD4	A0A091V6B6	C-C motif chemokine.	C-C motif chemokine.	0.741
N306_01873	N306_11254	A0A091WGD4	A0A091WN19	C-C motif chemokine.	C-C motif chemokine 19.	0.570
N306_01873	N306_11910	A0A091WGD4	A0A091WME4	C-C motif chemokine.	Interleukin-17F.	0.429
N306_01875	CXCL8-3	A0A091VDZ1	A0A091XI49	C-C motif chemokine.	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.	0.556
N306_01875	N306_01873	A0A091VDZ1	A0A091WGD4	C-C motif chemokine.	C-C motif chemokine.	0.871
N306_01875	N306_06292	A0A091VDZ1	A0A091W552	C-C motif chemokine.	Uncharacterized protein.	0.744
N306_01875	N306_07981	A0A091VDZ1	A0A091V6B6	C-C motif chemokine.	C-C motif chemokine.	0.708
N306_01875	N306_09883	A0A091VDZ1	A0A091WHG7	C-C motif chemokine.	Lymphotactin.	0.889
N306_01875	N306_11254	A0A091VDZ1	A0A091WN19	C-C motif chemokine.	C-C motif chemokine 19.	0.497