STRINGSTRING
Meso_0499 Meso_0499 Meso_0500 Meso_0500 Meso_0501 Meso_0501 Meso_0502 Meso_0502 Meso_0503 Meso_0503 Meso_0504 Meso_0504 Meso_0505 Meso_0505 Meso_0506 Meso_0506 Meso_0507 Meso_0507 Meso_0508 Meso_0508 Meso_0509 Meso_0509
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Meso_0499KEGG: mlo:msl9602 hypothetical protein. (84 aa)
Meso_0500PFAM: conjugation TrbI-like protein; KEGG: mlo:mll9603 conjugal transfer protein trbI. (399 aa)
Meso_0501PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bja:blr1619 conjugal transfer protein. (326 aa)
Meso_0502PFAM: Conjugal transfer protein; KEGG: mlo:mll9605 conjugal transfer protein trbF. (229 aa)
Meso_0503PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mlo:mll9606 conjugal transfer protein trbL. (449 aa)
Meso_0504KEGG: nar:Saro_0313 hypothetical protein. (93 aa)
Meso_0505KEGG: mlo:mll9607 conjugal transfer protein trbJ. (253 aa)
Meso_0506ATPase; SMART: ATPase; KEGG: mlo:mll9608 conjugal transfer protein trbE. (812 aa)
Meso_0507KEGG: mlo:mll9611 conjugal transfer protein trbB. (93 aa)
Meso_0508PFAM: Conjugal transfer protein TrbC; KEGG: mlo:mll9610 conjugal transfer protein trbC. (110 aa)
Meso_0509PFAM: type II secretion system protein E; KEGG: mlo:mll9612 conjugal transfer protein trbB. (329 aa)
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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