STRINGSTRING
flgH flgH XM1_2170 XM1_2170 XM1_2419 XM1_2419 XM1_2494 XM1_2494 XM1_2550 XM1_2550 bamA bamA XM1_3624 XM1_3624 XM1_3805 XM1_3805 XM1_4065 XM1_4065 bepC bepC XM1_0138 XM1_0138 czcB-2 czcB-2 XM1_4542 XM1_4542 XM1_0218 XM1_0218 omp omp XM1_4427 XM1_4427 XM1_0564 XM1_0564 XM1_0608 XM1_0608 XM1_0894 XM1_0894 XM1_4403 XM1_4403 bamD bamD lptD lptD XM1_1793 XM1_1793 XM1_4327 XM1_4327 XM1_1967 XM1_1967
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
flgHFlagellar L-ring protein flgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (263 aa)
XM1_2170Outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (536 aa)
XM1_2419Putative Carbohydrate-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (465 aa)
XM1_2494Homologs of previously reported genes of unknown function. (98 aa)
XM1_2550Putative flagellin structural protein (Part 2); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (372 aa)
bamAPutative outer membrane protein assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (755 aa)
XM1_3624Uncharacterized protein; Homologs of previously reported genes of unknown function. (209 aa)
XM1_3805Carbohydrate-selective porin; Function of strongly homologous gene; transporter. (465 aa)
XM1_4065Conserved protein of unknown function (Lysozyme-like domain 89-242); Homologs of previously reported genes of unknown function. (246 aa)
bepCOuter membrane efflux protein; Function of strongly homologous gene; transporter. (430 aa)
XM1_0138Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (707 aa)
czcB-2Heavy metal RND efflux membrane fusion protein, CzcB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (273 aa)
XM1_4542TonB-dependent receptor; Function of strongly homologous gene; transporter. (682 aa)
XM1_0218Putative Outer membrane protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (341 aa)
omp17 kDa surface antigen; Function of strongly homologous gene; lipoprotein. (157 aa)
XM1_4427Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (668 aa)
XM1_0564Porin; Homologs of previously reported genes of unknown function. (486 aa)
XM1_0608Putative polysaccharide deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (340 aa)
XM1_0894Homologs of previously reported genes of unknown function. (278 aa)
XM1_4403TonB-dependent receptor; Function of strongly homologous gene; receptor. (701 aa)
bamDOuter membrane protein assembly factor BamD(Outer membrane protein assembly factor BamD,14-245); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (306 aa)
lptDLPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (924 aa)
XM1_1793Putative TonB-dependent receptor plug（TonB-dependent receptor, beta-barrel,167-669） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (670 aa)
XM1_4327Putative carbohydrate-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (461 aa)
XM1_1967Uncharacterized protein; Homologs of previously reported genes of unknown function. (443 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.