(40 nodes) Mixed, incl. ABC transporter, maltose/maltodextrin import, MalK-like, and Carbohydrate transmembrane transporter activity network (Martelella endophytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJY44634.1	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (342 aa)
	AJY44635.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	AJY44636.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	AJY47844.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
	AJY44828.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
	ugpC	Glycerol-3-phosphate transporter ATP-binding subunit; Part of the UgpABCE glycerol-3-phosphate uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
	AJY44830.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	AJY44831.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	AJY47873.1	Polyols ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
	AJY45254.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
	AJY45255.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
	AJY45256.1	Mannitol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	AJY45257.1	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (333 aa)
	AJY45390.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (355 aa)
	AJY45472.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	AJY45473.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	AJY45474.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (360 aa)
	AJY45475.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
	AJY47999.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (352 aa)
	AJY46048.1	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (333 aa)
	AJY46049.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
	AJY46050.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AJY46051.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	AJY46053.1	ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	AJY46265.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (381 aa)
	AJY46319.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (350 aa)
	AJY48177.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	AJY46320.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
	AJY48178.1	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
	AJY46333.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (377 aa)
	AJY46334.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	AJY46335.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	AJY46336.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	AJY46337.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
	AJY47309.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (369 aa)
	AJY47469.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
	AJY47470.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
	AJY47471.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	AJY47472.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (352 aa)
	AJY47745.1	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (328 aa)

Your Current Organism:

Martelella endophytica

NCBI taxonomy Id: 1486262
Other names: KCCM 43011, M. endophytica, Martelella endophytica Bibi et al. 2013, NBRC 109149, strain YC6887

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJY44634.1	AJY44635.1	TM49_01345	TM49_01350	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
AJY44634.1	AJY44636.1	TM49_01345	TM49_01355	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
AJY44634.1	AJY44830.1	TM49_01345	TM49_02610	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AJY44634.1	AJY45254.1	TM49_01345	TM49_05365	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
AJY44634.1	AJY45255.1	TM49_01345	TM49_05370	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.890
AJY44634.1	AJY45256.1	TM49_01345	TM49_05375	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Mannitol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
AJY44634.1	AJY45472.1	TM49_01345	TM49_06825	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.871
AJY44634.1	AJY45473.1	TM49_01345	TM49_06830	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
AJY44634.1	AJY45475.1	TM49_01345	TM49_06840	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
AJY44634.1	AJY47469.1	TM49_01345	TM49_20230	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.478
AJY44634.1	AJY47844.1	TM49_01345	TM49_01360	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AJY44634.1	ugpC	TM49_01345	TM49_02605	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate transporter ATP-binding subunit; Part of the UgpABCE glycerol-3-phosphate uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
AJY44635.1	AJY44634.1	TM49_01350	TM49_01345	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.967
AJY44635.1	AJY44636.1	TM49_01350	TM49_01355	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AJY44635.1	AJY44831.1	TM49_01350	TM49_02615	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
AJY44635.1	AJY45257.1	TM49_01350	TM49_05380	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.846
AJY44635.1	AJY45472.1	TM49_01350	TM49_06825	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AJY44635.1	AJY45473.1	TM49_01350	TM49_06830	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
AJY44635.1	AJY45474.1	TM49_01350	TM49_06835	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.846
AJY44635.1	AJY45475.1	TM49_01350	TM49_06840	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963