31 items (Pediculus humanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E0VQ52_PEDHC	Myocyte-specific enhancer factor 2A, putative. (414 aa)
	E0VTG4_PEDHC	ELL domain-containing protein. (51 aa)
	E0VBM8_PEDHC	Cyclin t, putative; Belongs to the cyclin family. (1966 aa)
	E0VB75_PEDHC	FACT complex subunit SPT16, putative. (1081 aa)
	E0V9P7_PEDHC	Uncharacterized protein. (441 aa)
	E0V9I1_PEDHC	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (116 aa)
	E0V997_PEDHC	SET-binding factor, putative. (1980 aa)
	E0VCK2_PEDHC	Dhand, putative. (156 aa)
	E0VDI2_PEDHC	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1783 aa)
	E0VDW0_PEDHC	Uncharacterized protein. (574 aa)
	E0VFF4_PEDHC	Uncharacterized protein. (1341 aa)
	E0VFH3_PEDHC	Zinc finger protein MYND domain-containing protein, putative. (593 aa)
	E0VFP6_PEDHC	Protein C22orf19, putative. (674 aa)
	E0VHX1_PEDHC	DNA replication complex GINS protein PSF2, putative. (209 aa)
	E0VIU5_PEDHC	DNA repair and recombination protein RAD26, putative. (1206 aa)
	E0VMC4_PEDHC	RING finger protein, putative. (390 aa)
	E0VP16_PEDHC	USP domain-containing protein; Belongs to the peptidase C19 family. (1009 aa)
	E0W480_PEDHC	Negative elongation factor E, putative. (273 aa)
	E0W2T5_PEDHC	Lupus la ribonucleoprotein, putative. (527 aa)
	E0VZW3_PEDHC	Negative elongation factor D, putative. (580 aa)
	E0VXH5_PEDHC	Mitogen-activated protein kinase ERK-A, putative; Belongs to the protein kinase superfamily. (382 aa)
	E0VX24_PEDHC	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (563 aa)
	E0VWK9_PEDHC	Cyclin-K, putative; Belongs to the cyclin family. (397 aa)
	E0VVR3_PEDHC	Mitogen-activated protein kinase ERK-A, putative. (2225 aa)
	E0VV17_PEDHC	THO complex subunit, putative. (597 aa)
	E0VUI2_PEDHC	PWWP domain-containing protein. (755 aa)
	E0VUG0_PEDHC	Uncharacterized protein. (345 aa)
	E0VUD9_PEDHC	RNA polymerase-associated protein LEO1, putative. (748 aa)
	E0VTK9_PEDHC	Negative elongation factor A, putative. (546 aa)
	E0VPB3_PEDHC	Parafibromin, putative. (505 aa)
	E0VS63_PEDHC	Transcription elongation factor SPT5. (1122 aa)

Your Current Organism:

Pediculus humanus

NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0V997_PEDHC	E0VUG0_PEDHC	E0V997	E0VUG0	SET-binding factor, putative.	Uncharacterized protein.	0.422
E0V9I1_PEDHC	E0V9P7_PEDHC	E0V9I1	E0V9P7	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Uncharacterized protein.	0.604
E0V9I1_PEDHC	E0VB75_PEDHC	E0V9I1	E0VB75	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	FACT complex subunit SPT16, putative.	0.979
E0V9I1_PEDHC	E0VBM8_PEDHC	E0V9I1	E0VBM8	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Cyclin t, putative; Belongs to the cyclin family.	0.802
E0V9I1_PEDHC	E0VDI2_PEDHC	E0V9I1	E0VDI2	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.962
E0V9I1_PEDHC	E0VDW0_PEDHC	E0V9I1	E0VDW0	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Uncharacterized protein.	0.918
E0V9I1_PEDHC	E0VIU5_PEDHC	E0V9I1	E0VIU5	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	DNA repair and recombination protein RAD26, putative.	0.659
E0V9I1_PEDHC	E0VPB3_PEDHC	E0V9I1	E0VPB3	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Parafibromin, putative.	0.941
E0V9I1_PEDHC	E0VS63_PEDHC	E0V9I1	E0VS63	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Transcription elongation factor SPT5.	0.998
E0V9I1_PEDHC	E0VTG4_PEDHC	E0V9I1	E0VTG4	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	ELL domain-containing protein.	0.604
E0V9I1_PEDHC	E0VTK9_PEDHC	E0V9I1	E0VTK9	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Negative elongation factor A, putative.	0.872
E0V9I1_PEDHC	E0VUD9_PEDHC	E0V9I1	E0VUD9	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	RNA polymerase-associated protein LEO1, putative.	0.994
E0V9I1_PEDHC	E0VVR3_PEDHC	E0V9I1	E0VVR3	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Mitogen-activated protein kinase ERK-A, putative.	0.853
E0V9I1_PEDHC	E0VWK9_PEDHC	E0V9I1	E0VWK9	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Cyclin-K, putative; Belongs to the cyclin family.	0.828
E0V9I1_PEDHC	E0VX24_PEDHC	E0V9I1	E0VX24	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.657
E0V9I1_PEDHC	E0VXH5_PEDHC	E0V9I1	E0VXH5	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Mitogen-activated protein kinase ERK-A, putative; Belongs to the protein kinase superfamily.	0.847
E0V9I1_PEDHC	E0VZW3_PEDHC	E0V9I1	E0VZW3	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Negative elongation factor D, putative.	0.881
E0V9I1_PEDHC	E0W480_PEDHC	E0V9I1	E0W480	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Negative elongation factor E, putative.	0.913
E0V9P7_PEDHC	E0V9I1_PEDHC	E0V9P7	E0V9I1	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.604
E0V9P7_PEDHC	E0VB75_PEDHC	E0V9P7	E0VB75	Uncharacterized protein.	FACT complex subunit SPT16, putative.	0.613