6 items (Serendipita indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIIN_05449	Reverse transcriptase Ty1/copia-type domain-containing protein. (333 aa)
	PIIN_09311	Integrase catalytic domain-containing protein. (728 aa)
	PIIN_09621	Integrase catalytic domain-containing protein. (804 aa)
	PIIN_10301	Uncharacterized protein. (379 aa)
	PIIN_10412	Integrase catalytic domain-containing protein. (804 aa)
	PIIN_10750	Reverse transcriptase Ty1/copia-type domain-containing protein. (331 aa)

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIIN_05449	PIIN_09311	G4TJL9	G4TVI3	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.651
PIIN_05449	PIIN_09621	G4TJL9	G4TWD7	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.606
PIIN_05449	PIIN_10412	G4TJL9	G4TYM6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.585
PIIN_09311	PIIN_05449	G4TVI3	G4TJL9	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.651
PIIN_09311	PIIN_10301	G4TVI3	G4TYB3	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.676
PIIN_09311	PIIN_10750	G4TVI3	G4TZM0	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.653
PIIN_09621	PIIN_05449	G4TWD7	G4TJL9	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.606
PIIN_09621	PIIN_10301	G4TWD7	G4TYB3	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.651
PIIN_09621	PIIN_10750	G4TWD7	G4TZM0	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.621
PIIN_10301	PIIN_09311	G4TYB3	G4TVI3	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.676
PIIN_10301	PIIN_09621	G4TYB3	G4TWD7	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.651
PIIN_10301	PIIN_10412	G4TYB3	G4TYM6	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.640
PIIN_10412	PIIN_05449	G4TYM6	G4TJL9	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.585
PIIN_10412	PIIN_10301	G4TYM6	G4TYB3	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.640
PIIN_10412	PIIN_10750	G4TYM6	G4TZM0	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.580
PIIN_10750	PIIN_09311	G4TZM0	G4TVI3	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.653
PIIN_10750	PIIN_09621	G4TZM0	G4TWD7	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.621
PIIN_10750	PIIN_10412	G4TZM0	G4TYM6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.580